RNA–Protein interactions for RNA: ENST00000361283.2

CHAMP1-201, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAMP1, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-201ENST00000361283 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
CHAMP1-201ENST00000361283 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
CHAMP1-201ENST00000361283 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
CHAMP1-201ENST00000361283 MT1MQ8N339 61 aa3.88□□□□□ -1.79
CHAMP1-201ENST00000361283 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
CHAMP1-201ENST00000361283 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
CHAMP1-201ENST00000361283 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
CHAMP1-201ENST00000361283 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
CHAMP1-201ENST00000361283 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
CHAMP1-201ENST00000361283 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
CHAMP1-201ENST00000361283 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
CHAMP1-201ENST00000361283 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
CHAMP1-201ENST00000361283 H3BS24 57 aa3.73□□□□□ -1.81
CHAMP1-201ENST00000361283 SPRR2EP22531 72 aa3.71□□□□□ -1.82
CHAMP1-201ENST00000361283 SPRR2BP35325 72 aa3.71□□□□□ -1.82
CHAMP1-201ENST00000361283 SPRR2AP35326 72 aa3.71□□□□□ -1.82
CHAMP1-201ENST00000361283 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
CHAMP1-201ENST00000361283 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
CHAMP1-201ENST00000361283 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.82
CHAMP1-201ENST00000361283 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.82
CHAMP1-201ENST00000361283 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.82
CHAMP1-201ENST00000361283 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
CHAMP1-201ENST00000361283 SPRR2DP22532 72 aa3.58□□□□□ -1.84
CHAMP1-201ENST00000361283 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
CHAMP1-201ENST00000361283 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
CHAMP1-201ENST00000361283 NEBP20929 6669 aa3.5□□□□□ -1.85
CHAMP1-201ENST00000361283 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
CHAMP1-201ENST00000361283 MT1AP04731 61 aa3.47□□□□□ -1.85
CHAMP1-201ENST00000361283 LCE3BQ5TA77 95 aa3.43□□□□□ -1.86
CHAMP1-201ENST00000361283 INE1O15225 51 aa3.42□□□□□ -1.86
CHAMP1-201ENST00000361283 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
CHAMP1-201ENST00000361283 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
CHAMP1-201ENST00000361283 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
CHAMP1-201ENST00000361283 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
CHAMP1-201ENST00000361283 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
CHAMP1-201ENST00000361283 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
CHAMP1-201ENST00000361283 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
CHAMP1-201ENST00000361283 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
CHAMP1-201ENST00000361283 MT3P25713 68 aa3.13□□□□□ -1.91
CHAMP1-201ENST00000361283 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
CHAMP1-201ENST00000361283 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
CHAMP1-201ENST00000361283 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
CHAMP1-201ENST00000361283 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
CHAMP1-201ENST00000361283 MT4P47944 62 aa3.07□□□□□ -1.92
CHAMP1-201ENST00000361283 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
CHAMP1-201ENST00000361283 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
CHAMP1-201ENST00000361283 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
CHAMP1-201ENST00000361283 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
CHAMP1-201ENST00000361283 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
CHAMP1-201ENST00000361283 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
CHAMP1-201ENST00000361283 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
CHAMP1-201ENST00000361283 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
CHAMP1-201ENST00000361283 PRM1P04553 51 aa2.65□□□□□ -1.99
CHAMP1-201ENST00000361283 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
CHAMP1-201ENST00000361283 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
CHAMP1-201ENST00000361283 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -2
CHAMP1-201ENST00000361283 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
CHAMP1-201ENST00000361283 LCE1CQ5T751 118 aa2.54□□□□□ -2
CHAMP1-201ENST00000361283 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
CHAMP1-201ENST00000361283 KRTAP5-8O75690 187 aa2.53□□□□□ -2
CHAMP1-201ENST00000361283 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
CHAMP1-201ENST00000361283 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
CHAMP1-201ENST00000361283 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
CHAMP1-201ENST00000361283 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
CHAMP1-201ENST00000361283 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
CHAMP1-201ENST00000361283 KRTAP9-9Q9BYP9 154 aa2.25□□□□□ -2.05
CHAMP1-201ENST00000361283 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
CHAMP1-201ENST00000361283 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
CHAMP1-201ENST00000361283 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
CHAMP1-201ENST00000361283 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
CHAMP1-201ENST00000361283 LCE1FQ5T754 118 aa2□□□□□ -2.09
CHAMP1-201ENST00000361283 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
CHAMP1-201ENST00000361283 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
CHAMP1-201ENST00000361283 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
CHAMP1-201ENST00000361283 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
CHAMP1-201ENST00000361283 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
CHAMP1-201ENST00000361283 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 139.3 ms