RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 KRTAP9-2Q9BYQ4 174 aa6.62□□□□□ -1.35
SMURF1-201ENST00000361125 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
SMURF1-201ENST00000361125 MT4P47944 62 aa6.57□□□□□ -1.36
SMURF1-201ENST00000361125 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
SMURF1-201ENST00000361125 FAT4Q6V0I7 4981 aa6.46□□□□□ -1.38
SMURF1-201ENST00000361125 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
SMURF1-201ENST00000361125 MT3P25713 68 aa6.4□□□□□ -1.39
SMURF1-201ENST00000361125 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
SMURF1-201ENST00000361125 RNF213Q63HN8 5207 aa6.37□□□□□ -1.39
SMURF1-201ENST00000361125 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
SMURF1-201ENST00000361125 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
SMURF1-201ENST00000361125 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
SMURF1-201ENST00000361125 PRM1P04553 51 aa6.26□□□□□ -1.41
SMURF1-201ENST00000361125 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
SMURF1-201ENST00000361125 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
SMURF1-201ENST00000361125 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
SMURF1-201ENST00000361125 LCE1BQ5T7P3 118 aa6.2□□□□□ -1.42
SMURF1-201ENST00000361125 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
SMURF1-201ENST00000361125 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
SMURF1-201ENST00000361125 KRTAP9-6A8MVA2 160 aa6.1□□□□□ -1.43
SMURF1-201ENST00000361125 MT1AP04731 61 aa6.1□□□□□ -1.43
SMURF1-201ENST00000361125 MUC2Q02817 5179 aa6.09□□□□□ -1.44
SMURF1-201ENST00000361125 SYNE2Q8WXH0 6885 aaKnown RBP5.97□□□□□ -1.45
SMURF1-201ENST00000361125 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.46
SMURF1-201ENST00000361125 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
SMURF1-201ENST00000361125 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
SMURF1-201ENST00000361125 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
SMURF1-201ENST00000361125 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
SMURF1-201ENST00000361125 KRTAP6-2Q3LI66 62 aa5.77□□□□□ -1.49
SMURF1-201ENST00000361125 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
SMURF1-201ENST00000361125 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.49
SMURF1-201ENST00000361125 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
SMURF1-201ENST00000361125 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
SMURF1-201ENST00000361125 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
SMURF1-201ENST00000361125 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
SMURF1-201ENST00000361125 KMT2DO14686 5537 aa5.46□□□□□ -1.54
SMURF1-201ENST00000361125 USH2AO75445 5202 aa5.4□□□□□ -1.54
SMURF1-201ENST00000361125 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
SMURF1-201ENST00000361125 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
SMURF1-201ENST00000361125 LCE1CQ5T751 118 aa5.24□□□□□ -1.57
SMURF1-201ENST00000361125 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
SMURF1-201ENST00000361125 LCE1FQ5T754 118 aa5.24□□□□□ -1.57
SMURF1-201ENST00000361125 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
SMURF1-201ENST00000361125 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
SMURF1-201ENST00000361125 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
SMURF1-201ENST00000361125 KRTAP5-9P26371 169 aa4.97□□□□□ -1.61
SMURF1-201ENST00000361125 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
SMURF1-201ENST00000361125 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
SMURF1-201ENST00000361125 NEBP20929 6669 aa4.86□□□□□ -1.63
SMURF1-201ENST00000361125 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
SMURF1-201ENST00000361125 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
SMURF1-201ENST00000361125 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
SMURF1-201ENST00000361125 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
SMURF1-201ENST00000361125 KRTAP4-4Q9BYR3 166 aa4.43□□□□□ -1.7
SMURF1-201ENST00000361125 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.7
SMURF1-201ENST00000361125 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
SMURF1-201ENST00000361125 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
SMURF1-201ENST00000361125 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
SMURF1-201ENST00000361125 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
SMURF1-201ENST00000361125 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
SMURF1-201ENST00000361125 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
SMURF1-201ENST00000361125 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
SMURF1-201ENST00000361125 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
SMURF1-201ENST00000361125 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
SMURF1-201ENST00000361125 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
SMURF1-201ENST00000361125 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
SMURF1-201ENST00000361125 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.89
SMURF1-201ENST00000361125 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
SMURF1-201ENST00000361125 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
SMURF1-201ENST00000361125 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
SMURF1-201ENST00000361125 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
SMURF1-201ENST00000361125 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
SMURF1-201ENST00000361125 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
SMURF1-201ENST00000361125 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
SMURF1-201ENST00000361125 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.96
SMURF1-201ENST00000361125 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
SMURF1-201ENST00000361125 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms