RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 INE1O15225 51 aa4.63□□□□□ -1.67
UBA3-202ENST00000361055 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
UBA3-202ENST00000361055 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
UBA3-202ENST00000361055 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
UBA3-202ENST00000361055 KMT2DO14686 5537 aa4.58□□□□□ -1.68
UBA3-202ENST00000361055 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
UBA3-202ENST00000361055 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
UBA3-202ENST00000361055 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
UBA3-202ENST00000361055 MACF1Q9UPN3 7388 aaKnown RBP4.54□□□□□ -1.68
UBA3-202ENST00000361055 SYNE2Q8WXH0 6885 aaKnown RBP4.44□□□□□ -1.7
UBA3-202ENST00000361055 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
UBA3-202ENST00000361055 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
UBA3-202ENST00000361055 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
UBA3-202ENST00000361055 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
UBA3-202ENST00000361055 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
UBA3-202ENST00000361055 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
UBA3-202ENST00000361055 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
UBA3-202ENST00000361055 MT1EP04732 61 aa4.31□□□□□ -1.72
UBA3-202ENST00000361055 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
UBA3-202ENST00000361055 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
UBA3-202ENST00000361055 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
UBA3-202ENST00000361055 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
UBA3-202ENST00000361055 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
UBA3-202ENST00000361055 MT1LQ93083 61 aa4.26□□□□□ -1.73
UBA3-202ENST00000361055 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
UBA3-202ENST00000361055 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
UBA3-202ENST00000361055 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
UBA3-202ENST00000361055 SPRR2EP22531 72 aa4.17□□□□□ -1.74
UBA3-202ENST00000361055 SPRR2BP35325 72 aa4.17□□□□□ -1.74
UBA3-202ENST00000361055 SPRR2AP35326 72 aa4.17□□□□□ -1.74
UBA3-202ENST00000361055 NEBP20929 6669 aa4.14□□□□□ -1.75
UBA3-202ENST00000361055 MT1GP13640 62 aa4.14□□□□□ -1.75
UBA3-202ENST00000361055 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
UBA3-202ENST00000361055 MT1MQ8N339 61 aa4.07□□□□□ -1.76
UBA3-202ENST00000361055 SPRR2DP22532 72 aa4.02□□□□□ -1.77
UBA3-202ENST00000361055 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
UBA3-202ENST00000361055 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
UBA3-202ENST00000361055 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
UBA3-202ENST00000361055 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
UBA3-202ENST00000361055 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
UBA3-202ENST00000361055 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
UBA3-202ENST00000361055 MT1AP04731 61 aa3.67□□□□□ -1.82
UBA3-202ENST00000361055 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
UBA3-202ENST00000361055 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
UBA3-202ENST00000361055 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
UBA3-202ENST00000361055 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
UBA3-202ENST00000361055 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
UBA3-202ENST00000361055 MT4P47944 62 aa3.48□□□□□ -1.85
UBA3-202ENST00000361055 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
UBA3-202ENST00000361055 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
UBA3-202ENST00000361055 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
UBA3-202ENST00000361055 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
UBA3-202ENST00000361055 PRM1P04553 51 aa3.31□□□□□ -1.88
UBA3-202ENST00000361055 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
UBA3-202ENST00000361055 MT3P25713 68 aa3.25□□□□□ -1.89
UBA3-202ENST00000361055 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
UBA3-202ENST00000361055 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
UBA3-202ENST00000361055 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
UBA3-202ENST00000361055 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
UBA3-202ENST00000361055 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
UBA3-202ENST00000361055 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
UBA3-202ENST00000361055 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
UBA3-202ENST00000361055 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
UBA3-202ENST00000361055 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
UBA3-202ENST00000361055 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
UBA3-202ENST00000361055 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.97
UBA3-202ENST00000361055 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
UBA3-202ENST00000361055 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
UBA3-202ENST00000361055 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
UBA3-202ENST00000361055 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
UBA3-202ENST00000361055 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
UBA3-202ENST00000361055 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
UBA3-202ENST00000361055 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.04
UBA3-202ENST00000361055 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
UBA3-202ENST00000361055 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
UBA3-202ENST00000361055 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
UBA3-202ENST00000361055 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms