RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
SCAF1-201ENST00000360565 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
SCAF1-201ENST00000360565 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
SCAF1-201ENST00000360565 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
SCAF1-201ENST00000360565 MT1MQ8N339 61 aa5.2□□□□□ -1.58
SCAF1-201ENST00000360565 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
SCAF1-201ENST00000360565 USH2AO75445 5202 aa5.19□□□□□ -1.58
SCAF1-201ENST00000360565 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
SCAF1-201ENST00000360565 SPRR2DP22532 72 aa5.14□□□□□ -1.59
SCAF1-201ENST00000360565 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
SCAF1-201ENST00000360565 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
SCAF1-201ENST00000360565 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
SCAF1-201ENST00000360565 FCGBPQ9Y6R7 5405 aaPredicted RBP4.99□□□□□ -1.61
SCAF1-201ENST00000360565 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
SCAF1-201ENST00000360565 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
SCAF1-201ENST00000360565 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
SCAF1-201ENST00000360565 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
SCAF1-201ENST00000360565 KMT2DO14686 5537 aa4.94□□□□□ -1.62
SCAF1-201ENST00000360565 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
SCAF1-201ENST00000360565 LCE2DQ5TA82 110 aaPredicted RBP4.86□□□□□ -1.63
SCAF1-201ENST00000360565 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
SCAF1-201ENST00000360565 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
SCAF1-201ENST00000360565 MT3P25713 68 aa4.76□□□□□ -1.65
SCAF1-201ENST00000360565 MT1AP04731 61 aa4.76□□□□□ -1.65
SCAF1-201ENST00000360565 PRM1P04553 51 aa4.72□□□□□ -1.65
SCAF1-201ENST00000360565 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
SCAF1-201ENST00000360565 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
SCAF1-201ENST00000360565 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
SCAF1-201ENST00000360565 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
SCAF1-201ENST00000360565 MT4P47944 62 aa4.62□□□□□ -1.67
SCAF1-201ENST00000360565 MACF1Q9UPN3 7388 aaKnown RBP4.54□□□□□ -1.68
SCAF1-201ENST00000360565 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
SCAF1-201ENST00000360565 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
SCAF1-201ENST00000360565 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
SCAF1-201ENST00000360565 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
SCAF1-201ENST00000360565 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
SCAF1-201ENST00000360565 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
SCAF1-201ENST00000360565 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.71
SCAF1-201ENST00000360565 KRTAP9-7A8MTY7 169 aa4.31□□□□□ -1.72
SCAF1-201ENST00000360565 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
SCAF1-201ENST00000360565 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
SCAF1-201ENST00000360565 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
SCAF1-201ENST00000360565 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
SCAF1-201ENST00000360565 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
SCAF1-201ENST00000360565 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
SCAF1-201ENST00000360565 NEBP20929 6669 aa3.85□□□□□ -1.79
SCAF1-201ENST00000360565 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.79
SCAF1-201ENST00000360565 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
SCAF1-201ENST00000360565 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
SCAF1-201ENST00000360565 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
SCAF1-201ENST00000360565 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
SCAF1-201ENST00000360565 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
SCAF1-201ENST00000360565 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
SCAF1-201ENST00000360565 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
SCAF1-201ENST00000360565 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
SCAF1-201ENST00000360565 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
SCAF1-201ENST00000360565 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
SCAF1-201ENST00000360565 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
SCAF1-201ENST00000360565 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
SCAF1-201ENST00000360565 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
SCAF1-201ENST00000360565 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
SCAF1-201ENST00000360565 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
SCAF1-201ENST00000360565 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
SCAF1-201ENST00000360565 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
SCAF1-201ENST00000360565 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
SCAF1-201ENST00000360565 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
SCAF1-201ENST00000360565 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
SCAF1-201ENST00000360565 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
SCAF1-201ENST00000360565 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
SCAF1-201ENST00000360565 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
SCAF1-201ENST00000360565 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
SCAF1-201ENST00000360565 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
SCAF1-201ENST00000360565 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
SCAF1-201ENST00000360565 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
SCAF1-201ENST00000360565 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.06
SCAF1-201ENST00000360565 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
SCAF1-201ENST00000360565 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 145.9 ms