RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
PTPN22-201ENST00000359785 MT2AP02795 61 aa1.71□□□□□ -2.14
PTPN22-201ENST00000359785 MT1BP07438 61 aa1.71□□□□□ -2.14
PTPN22-201ENST00000359785 KRTAP10-7P60409 375 aaPredicted RBP1.7□□□□□ -2.14
PTPN22-201ENST00000359785 LCE3CQ5T5A8 94 aa1.69□□□□□ -2.14
PTPN22-201ENST00000359785 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
PTPN22-201ENST00000359785 KRTAP12-3P60328 96 aa1.68□□□□□ -2.14
PTPN22-201ENST00000359785 MT1EP04732 61 aa1.67□□□□□ -2.14
PTPN22-201ENST00000359785 MT1FP04733 61 aa1.66□□□□□ -2.14
PTPN22-201ENST00000359785 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
PTPN22-201ENST00000359785 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
PTPN22-201ENST00000359785 KRTAP19-6Q3LI70 58 aa1.62□□□□□ -2.15
PTPN22-201ENST00000359785 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
PTPN22-201ENST00000359785 DMBT1Q9UGM3 2413 aaPredicted RBP1.61□□□□□ -2.15
PTPN22-201ENST00000359785 MT1AP04731 61 aa1.59□□□□□ -2.16
PTPN22-201ENST00000359785 LCE1EQ5T753 118 aa1.59□□□□□ -2.16
PTPN22-201ENST00000359785 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.16
PTPN22-201ENST00000359785 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
PTPN22-201ENST00000359785 KRTAP9-6A8MVA2 160 aa1.58□□□□□ -2.16
PTPN22-201ENST00000359785 M0R2T5 61 aa1.58□□□□□ -2.16
PTPN22-201ENST00000359785 FAT4Q6V0I7 4981 aa1.57□□□□□ -2.16
PTPN22-201ENST00000359785 KRTAP19-7Q3SYF9 63 aa1.56□□□□□ -2.16
PTPN22-201ENST00000359785 MT1LQ93083 61 aa1.55□□□□□ -2.16
PTPN22-201ENST00000359785 UBR4Q5T4S7 5183 aa1.51□□□□□ -2.17
PTPN22-201ENST00000359785 SSPOA2VEC9 5147 aa1.45□□□□□ -2.18
PTPN22-201ENST00000359785 LCE1AQ5T7P2 110 aa1.44□□□□□ -2.18
PTPN22-201ENST00000359785 OBSCNQ5VST9 7968 aa1.43□□□□□ -2.18
PTPN22-201ENST00000359785 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
PTPN22-201ENST00000359785 KRTAP2-2Q9BYT5 123 aa1.42□□□□□ -2.18
PTPN22-201ENST00000359785 USH2AO75445 5202 aa1.42□□□□□ -2.18
PTPN22-201ENST00000359785 KRTAP5-5Q701N2 237 aaPredicted RBP1.41□□□□□ -2.18
PTPN22-201ENST00000359785 KRTAP6-3Q3LI67 103 aa1.41□□□□□ -2.18
PTPN22-201ENST00000359785 MT1GP13640 62 aa1.39□□□□□ -2.19
PTPN22-201ENST00000359785 MT1MQ8N339 61 aa1.39□□□□□ -2.19
PTPN22-201ENST00000359785 MUC2Q02817 5179 aa1.39□□□□□ -2.19
PTPN22-201ENST00000359785 KRTAP4-3Q9BYR4 195 aa1.38□□□□□ -2.19
PTPN22-201ENST00000359785 CRCT1Q9UGL9 99 aa1.38□□□□□ -2.19
PTPN22-201ENST00000359785 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
PTPN22-201ENST00000359785 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
PTPN22-201ENST00000359785 MT3P25713 68 aa1.34□□□□□ -2.2
PTPN22-201ENST00000359785 GPR98Q8WXG9 6306 aa1.33□□□□□ -2.2
PTPN22-201ENST00000359785 SPRR2AP35326 72 aa1.33□□□□□ -2.2
PTPN22-201ENST00000359785 KRTAP12-4P60329 112 aa1.31□□□□□ -2.2
PTPN22-201ENST00000359785 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
PTPN22-201ENST00000359785 SPRR2BP35325 72 aa1.28□□□□□ -2.2
PTPN22-201ENST00000359785 LCE3EQ5T5B0 92 aa1.27□□□□□ -2.21
PTPN22-201ENST00000359785 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
PTPN22-201ENST00000359785 SPRR2EP22531 72 aa1.22□□□□□ -2.21
PTPN22-201ENST00000359785 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
PTPN22-201ENST00000359785 FCGBPQ9Y6R7 5405 aaPredicted RBP1.19□□□□□ -2.22
PTPN22-201ENST00000359785 PRM1P04553 51 aa1.19□□□□□ -2.22
PTPN22-201ENST00000359785 KMT2DO14686 5537 aa1.18□□□□□ -2.22
PTPN22-201ENST00000359785 SPRR2DP22532 72 aa1.18□□□□□ -2.22
PTPN22-201ENST00000359785 KRTAP6-2Q3LI66 62 aa1.17□□□□□ -2.22
PTPN22-201ENST00000359785 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
PTPN22-201ENST00000359785 KRTAP20-1Q3LI63 56 aa1.14□□□□□ -2.23
PTPN22-201ENST00000359785 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
PTPN22-201ENST00000359785 NEBP20929 6669 aa1.11□□□□□ -2.23
PTPN22-201ENST00000359785 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
PTPN22-201ENST00000359785 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
PTPN22-201ENST00000359785 KRTAP20-2Q3LI61 65 aa1.06□□□□□ -2.24
PTPN22-201ENST00000359785 DSTQ03001 7570 aaKnown RBP1.06□□□□□ -2.24
PTPN22-201ENST00000359785 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
PTPN22-201ENST00000359785 MDN1Q9NU22 5596 aa1.04□□□□□ -2.24
PTPN22-201ENST00000359785 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
PTPN22-201ENST00000359785 SYNE1Q8NF91 8797 aaKnown RBP1.03□□□□□ -2.24
PTPN22-201ENST00000359785 MACF1Q9UPN3 7388 aaKnown RBP0.99□□□□□ -2.25
PTPN22-201ENST00000359785 LCE1CQ5T751 118 aa0.99□□□□□ -2.25
PTPN22-201ENST00000359785 LCE1BQ5T7P3 118 aa0.99□□□□□ -2.25
PTPN22-201ENST00000359785 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
PTPN22-201ENST00000359785 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
PTPN22-201ENST00000359785 SYNE2Q8WXH0 6885 aaKnown RBP0.89□□□□□ -2.27
PTPN22-201ENST00000359785 FSIP2Q5CZC0 6907 aa0.88□□□□□ -2.27
PTPN22-201ENST00000359785 MT4P47944 62 aa0.87□□□□□ -2.27
PTPN22-201ENST00000359785 MUC5ACP98088 5654 aa0.84□□□□□ -2.27
PTPN22-201ENST00000359785 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
PTPN22-201ENST00000359785 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 138 ms