RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
NIF3L1-201ENST00000359683 K7ERS5 55 aa5.01□□□□□ -1.61
NIF3L1-201ENST00000359683 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
NIF3L1-201ENST00000359683 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
NIF3L1-201ENST00000359683 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
NIF3L1-201ENST00000359683 C10orf95Q9H7T3 257 aa4.95□□□□□ -1.62
NIF3L1-201ENST00000359683 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
NIF3L1-201ENST00000359683 KMT2DO14686 5537 aa4.87□□□□□ -1.63
NIF3L1-201ENST00000359683 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
NIF3L1-201ENST00000359683 TNP1P09430 55 aa4.84□□□□□ -1.63
NIF3L1-201ENST00000359683 MDN1Q9NU22 5596 aa4.83□□□□□ -1.64
NIF3L1-201ENST00000359683 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
NIF3L1-201ENST00000359683 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
NIF3L1-201ENST00000359683 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
NIF3L1-201ENST00000359683 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
NIF3L1-201ENST00000359683 SPRR2EP22531 72 aa4.78□□□□□ -1.64
NIF3L1-201ENST00000359683 SPRR2BP35325 72 aa4.78□□□□□ -1.64
NIF3L1-201ENST00000359683 SPRR2AP35326 72 aa4.78□□□□□ -1.64
NIF3L1-201ENST00000359683 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
NIF3L1-201ENST00000359683 ROMO1P60602 79 aa4.75□□□□□ -1.65
NIF3L1-201ENST00000359683 KRTAP5-11Q6L8G4 156 aa4.73□□□□□ -1.65
NIF3L1-201ENST00000359683 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
NIF3L1-201ENST00000359683 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
NIF3L1-201ENST00000359683 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
NIF3L1-201ENST00000359683 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
NIF3L1-201ENST00000359683 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
NIF3L1-201ENST00000359683 SPRR2DP22532 72 aa4.61□□□□□ -1.67
NIF3L1-201ENST00000359683 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
NIF3L1-201ENST00000359683 MT1EP04732 61 aa4.57□□□□□ -1.68
NIF3L1-201ENST00000359683 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
NIF3L1-201ENST00000359683 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
NIF3L1-201ENST00000359683 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
NIF3L1-201ENST00000359683 KRTAP19-3Q7Z4W3 81 aa4.45□□□□□ -1.7
NIF3L1-201ENST00000359683 MT1LQ93083 61 aa4.43□□□□□ -1.7
NIF3L1-201ENST00000359683 MT1GP13640 62 aa4.4□□□□□ -1.7
NIF3L1-201ENST00000359683 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
NIF3L1-201ENST00000359683 MT1MQ8N339 61 aa4.32□□□□□ -1.72
NIF3L1-201ENST00000359683 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
NIF3L1-201ENST00000359683 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
NIF3L1-201ENST00000359683 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
NIF3L1-201ENST00000359683 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
NIF3L1-201ENST00000359683 MT3P25713 68 aa4.22□□□□□ -1.73
NIF3L1-201ENST00000359683 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
NIF3L1-201ENST00000359683 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
NIF3L1-201ENST00000359683 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
NIF3L1-201ENST00000359683 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
NIF3L1-201ENST00000359683 MT4P47944 62 aa4.06□□□□□ -1.76
NIF3L1-201ENST00000359683 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
NIF3L1-201ENST00000359683 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
NIF3L1-201ENST00000359683 AHNAK2Q8IVF2 5795 aa3.94□□□□□ -1.78
NIF3L1-201ENST00000359683 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
NIF3L1-201ENST00000359683 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
NIF3L1-201ENST00000359683 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
NIF3L1-201ENST00000359683 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
NIF3L1-201ENST00000359683 MT1AP04731 61 aa3.78□□□□□ -1.8
NIF3L1-201ENST00000359683 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
NIF3L1-201ENST00000359683 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
NIF3L1-201ENST00000359683 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
NIF3L1-201ENST00000359683 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
NIF3L1-201ENST00000359683 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
NIF3L1-201ENST00000359683 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
NIF3L1-201ENST00000359683 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
NIF3L1-201ENST00000359683 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
NIF3L1-201ENST00000359683 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
NIF3L1-201ENST00000359683 INE1O15225 51 aa3.3□□□□□ -1.88
NIF3L1-201ENST00000359683 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
NIF3L1-201ENST00000359683 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
NIF3L1-201ENST00000359683 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
NIF3L1-201ENST00000359683 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
NIF3L1-201ENST00000359683 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
NIF3L1-201ENST00000359683 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
NIF3L1-201ENST00000359683 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
NIF3L1-201ENST00000359683 PRM1P04553 51 aa2.46□□□□□ -2.02
NIF3L1-201ENST00000359683 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
NIF3L1-201ENST00000359683 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
NIF3L1-201ENST00000359683 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
NIF3L1-201ENST00000359683 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms