RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
DNMT1-202ENST00000359526 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
DNMT1-202ENST00000359526 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
DNMT1-202ENST00000359526 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
DNMT1-202ENST00000359526 MT1MQ8N339 61 aa3.86□□□□□ -1.79
DNMT1-202ENST00000359526 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
DNMT1-202ENST00000359526 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
DNMT1-202ENST00000359526 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
DNMT1-202ENST00000359526 MT3P25713 68 aa3.81□□□□□ -1.8
DNMT1-202ENST00000359526 PRM1P04553 51 aa3.77□□□□□ -1.81
DNMT1-202ENST00000359526 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
DNMT1-202ENST00000359526 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
DNMT1-202ENST00000359526 UBR4Q5T4S7 5183 aa3.73□□□□□ -1.81
DNMT1-202ENST00000359526 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
DNMT1-202ENST00000359526 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
DNMT1-202ENST00000359526 MT1AP04731 61 aa3.68□□□□□ -1.82
DNMT1-202ENST00000359526 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
DNMT1-202ENST00000359526 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
DNMT1-202ENST00000359526 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
DNMT1-202ENST00000359526 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
DNMT1-202ENST00000359526 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
DNMT1-202ENST00000359526 MUC2Q02817 5179 aa3.59□□□□□ -1.83
DNMT1-202ENST00000359526 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
DNMT1-202ENST00000359526 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
DNMT1-202ENST00000359526 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
DNMT1-202ENST00000359526 MT4P47944 62 aa3.52□□□□□ -1.85
DNMT1-202ENST00000359526 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
DNMT1-202ENST00000359526 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
DNMT1-202ENST00000359526 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
DNMT1-202ENST00000359526 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
DNMT1-202ENST00000359526 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
DNMT1-202ENST00000359526 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
DNMT1-202ENST00000359526 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
DNMT1-202ENST00000359526 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
DNMT1-202ENST00000359526 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.87
DNMT1-202ENST00000359526 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
DNMT1-202ENST00000359526 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
DNMT1-202ENST00000359526 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
DNMT1-202ENST00000359526 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
DNMT1-202ENST00000359526 USH2AO75445 5202 aa3.24□□□□□ -1.89
DNMT1-202ENST00000359526 KMT2DO14686 5537 aa3.13□□□□□ -1.91
DNMT1-202ENST00000359526 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
DNMT1-202ENST00000359526 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
DNMT1-202ENST00000359526 NEBP20929 6669 aa3□□□□□ -1.93
DNMT1-202ENST00000359526 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
DNMT1-202ENST00000359526 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
DNMT1-202ENST00000359526 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
DNMT1-202ENST00000359526 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
DNMT1-202ENST00000359526 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
DNMT1-202ENST00000359526 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
DNMT1-202ENST00000359526 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
DNMT1-202ENST00000359526 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
DNMT1-202ENST00000359526 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
DNMT1-202ENST00000359526 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
DNMT1-202ENST00000359526 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
DNMT1-202ENST00000359526 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
DNMT1-202ENST00000359526 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
DNMT1-202ENST00000359526 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
DNMT1-202ENST00000359526 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
DNMT1-202ENST00000359526 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
DNMT1-202ENST00000359526 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
DNMT1-202ENST00000359526 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
DNMT1-202ENST00000359526 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
DNMT1-202ENST00000359526 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
DNMT1-202ENST00000359526 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
DNMT1-202ENST00000359526 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
DNMT1-202ENST00000359526 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
DNMT1-202ENST00000359526 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
DNMT1-202ENST00000359526 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
DNMT1-202ENST00000359526 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
DNMT1-202ENST00000359526 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
DNMT1-202ENST00000359526 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
DNMT1-202ENST00000359526 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.1
DNMT1-202ENST00000359526 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
DNMT1-202ENST00000359526 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
DNMT1-202ENST00000359526 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
DNMT1-202ENST00000359526 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 122.3 ms