RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 LOC100996750A0A140TA64 210 aa6.92□□□□□ -1.3
TRIM3-202ENST00000359518 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
TRIM3-202ENST00000359518 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.3
TRIM3-202ENST00000359518 KRTAP19-6Q3LI70 58 aa6.86□□□□□ -1.31
TRIM3-202ENST00000359518 KRTAP9-2Q9BYQ4 174 aa6.85□□□□□ -1.31
TRIM3-202ENST00000359518 DSTQ03001 7570 aaKnown RBP6.82□□□□□ -1.32
TRIM3-202ENST00000359518 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
TRIM3-202ENST00000359518 MT1GP13640 62 aa6.8□□□□□ -1.32
TRIM3-202ENST00000359518 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
TRIM3-202ENST00000359518 MACF1Q9UPN3 7388 aaKnown RBP6.69□□□□□ -1.34
TRIM3-202ENST00000359518 MT1MQ8N339 61 aa6.62□□□□□ -1.35
TRIM3-202ENST00000359518 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
TRIM3-202ENST00000359518 KRTAP19-3Q7Z4W3 81 aa6.58□□□□□ -1.36
TRIM3-202ENST00000359518 KRTAP12-4P60329 112 aa6.45□□□□□ -1.38
TRIM3-202ENST00000359518 SYNE1Q8NF91 8797 aaKnown RBP6.44□□□□□ -1.38
TRIM3-202ENST00000359518 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
TRIM3-202ENST00000359518 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
TRIM3-202ENST00000359518 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
TRIM3-202ENST00000359518 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
TRIM3-202ENST00000359518 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
TRIM3-202ENST00000359518 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.41
TRIM3-202ENST00000359518 OBSCNQ5VST9 7968 aa6.18□□□□□ -1.42
TRIM3-202ENST00000359518 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
TRIM3-202ENST00000359518 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.08□□□□□ -1.44
TRIM3-202ENST00000359518 KRTAP5-9P26371 169 aa5.97□□□□□ -1.45
TRIM3-202ENST00000359518 SPRR2EP22531 72 aa5.93□□□□□ -1.46
TRIM3-202ENST00000359518 SPRR2BP35325 72 aa5.93□□□□□ -1.46
TRIM3-202ENST00000359518 SPRR2AP35326 72 aa5.93□□□□□ -1.46
TRIM3-202ENST00000359518 LCE3DQ9BYE3 92 aa5.93□□□□□ -1.46
TRIM3-202ENST00000359518 LCE1AQ5T7P2 110 aa5.92□□□□□ -1.46
TRIM3-202ENST00000359518 MT1AP04731 61 aa5.91□□□□□ -1.46
TRIM3-202ENST00000359518 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
TRIM3-202ENST00000359518 LCE3EQ5T5B0 92 aa5.83□□□□□ -1.48
TRIM3-202ENST00000359518 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
TRIM3-202ENST00000359518 KRTAP5-5Q701N2 237 aaPredicted RBP5.75□□□□□ -1.49
TRIM3-202ENST00000359518 PRM1P04553 51 aa5.74□□□□□ -1.49
TRIM3-202ENST00000359518 SPRR2DP22532 72 aa5.69□□□□□ -1.5
TRIM3-202ENST00000359518 NEBP20929 6669 aa5.6□□□□□ -1.51
TRIM3-202ENST00000359518 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
TRIM3-202ENST00000359518 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
TRIM3-202ENST00000359518 MT3P25713 68 aa5.32□□□□□ -1.56
TRIM3-202ENST00000359518 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
TRIM3-202ENST00000359518 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
TRIM3-202ENST00000359518 MT4P47944 62 aa5.09□□□□□ -1.59
TRIM3-202ENST00000359518 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
TRIM3-202ENST00000359518 KRTAP4-6Q9BYQ5 205 aa5.02□□□□□ -1.61
TRIM3-202ENST00000359518 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
TRIM3-202ENST00000359518 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
TRIM3-202ENST00000359518 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
TRIM3-202ENST00000359518 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
TRIM3-202ENST00000359518 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
TRIM3-202ENST00000359518 MUC19Q7Z5P9 8384 aa4.68□□□□□ -1.66
TRIM3-202ENST00000359518 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
TRIM3-202ENST00000359518 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
TRIM3-202ENST00000359518 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
TRIM3-202ENST00000359518 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
TRIM3-202ENST00000359518 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
TRIM3-202ENST00000359518 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
TRIM3-202ENST00000359518 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
TRIM3-202ENST00000359518 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
TRIM3-202ENST00000359518 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
TRIM3-202ENST00000359518 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
TRIM3-202ENST00000359518 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
TRIM3-202ENST00000359518 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
TRIM3-202ENST00000359518 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
TRIM3-202ENST00000359518 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
TRIM3-202ENST00000359518 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
TRIM3-202ENST00000359518 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
TRIM3-202ENST00000359518 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
TRIM3-202ENST00000359518 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
TRIM3-202ENST00000359518 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
TRIM3-202ENST00000359518 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
TRIM3-202ENST00000359518 KRTAP21-1Q3LI58 79 aa3.49□□□□□ -1.85
TRIM3-202ENST00000359518 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
TRIM3-202ENST00000359518 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
TRIM3-202ENST00000359518 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
TRIM3-202ENST00000359518 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 68.9 ms