RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 KRTAP10-7P60409 375 aaPredicted RBP2.92□□□□□ -1.94
KCNIP4-201ENST00000359001 MT1BP07438 61 aa2.9□□□□□ -1.94
KCNIP4-201ENST00000359001 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
KCNIP4-201ENST00000359001 KRTAP10-5P60370 271 aa2.86□□□□□ -1.95
KCNIP4-201ENST00000359001 MT1XP80297 61 aa2.86□□□□□ -1.95
KCNIP4-201ENST00000359001 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
KCNIP4-201ENST00000359001 KRTAP8-1Q8IUC2 63 aa2.82□□□□□ -1.96
KCNIP4-201ENST00000359001 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
KCNIP4-201ENST00000359001 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
KCNIP4-201ENST00000359001 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
KCNIP4-201ENST00000359001 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
KCNIP4-201ENST00000359001 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
KCNIP4-201ENST00000359001 USH2AO75445 5202 aa2.6□□□□□ -1.99
KCNIP4-201ENST00000359001 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
KCNIP4-201ENST00000359001 KRTAP19-7Q3SYF9 63 aa2.56□□□□□ -2
KCNIP4-201ENST00000359001 LCE1EQ5T753 118 aa2.56□□□□□ -2
KCNIP4-201ENST00000359001 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
KCNIP4-201ENST00000359001 KMT2DO14686 5537 aa2.53□□□□□ -2
KCNIP4-201ENST00000359001 KRTAP5-8O75690 187 aa2.53□□□□□ -2
KCNIP4-201ENST00000359001 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
KCNIP4-201ENST00000359001 INE1O15225 51 aa2.51□□□□□ -2.01
KCNIP4-201ENST00000359001 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
KCNIP4-201ENST00000359001 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
KCNIP4-201ENST00000359001 MT1EP04732 61 aa2.49□□□□□ -2.01
KCNIP4-201ENST00000359001 MT1LQ93083 61 aa2.47□□□□□ -2.01
KCNIP4-201ENST00000359001 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
KCNIP4-201ENST00000359001 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.03
KCNIP4-201ENST00000359001 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.03
KCNIP4-201ENST00000359001 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
KCNIP4-201ENST00000359001 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
KCNIP4-201ENST00000359001 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
KCNIP4-201ENST00000359001 MT1MQ8N339 61 aa2.32□□□□□ -2.04
KCNIP4-201ENST00000359001 MT1GP13640 62 aa2.31□□□□□ -2.04
KCNIP4-201ENST00000359001 FCGBPQ9Y6R7 5405 aaPredicted RBP2.29□□□□□ -2.04
KCNIP4-201ENST00000359001 FSIP2Q5CZC0 6907 aa2.27□□□□□ -2.05
KCNIP4-201ENST00000359001 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
KCNIP4-201ENST00000359001 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
KCNIP4-201ENST00000359001 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
KCNIP4-201ENST00000359001 CRCT1Q9UGL9 99 aa2.17□□□□□ -2.06
KCNIP4-201ENST00000359001 LCE1AQ5T7P2 110 aa2.12□□□□□ -2.07
KCNIP4-201ENST00000359001 MACF1Q9UPN3 7388 aaKnown RBP2.12□□□□□ -2.07
KCNIP4-201ENST00000359001 MT1AP04731 61 aa2.09□□□□□ -2.08
KCNIP4-201ENST00000359001 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.08
KCNIP4-201ENST00000359001 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.08
KCNIP4-201ENST00000359001 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
KCNIP4-201ENST00000359001 KRTAP2-2Q9BYT5 123 aa2.05□□□□□ -2.08
KCNIP4-201ENST00000359001 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
KCNIP4-201ENST00000359001 SPRR2EP22531 72 aa2.04□□□□□ -2.08
KCNIP4-201ENST00000359001 SPRR2BP35325 72 aa2.04□□□□□ -2.08
KCNIP4-201ENST00000359001 SPRR2AP35326 72 aa2.04□□□□□ -2.08
KCNIP4-201ENST00000359001 MDN1Q9NU22 5596 aa2.02□□□□□ -2.09
KCNIP4-201ENST00000359001 SYNE2Q8WXH0 6885 aaKnown RBP1.99□□□□□ -2.09
KCNIP4-201ENST00000359001 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.1
KCNIP4-201ENST00000359001 SPRR2DP22532 72 aa1.95□□□□□ -2.1
KCNIP4-201ENST00000359001 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
KCNIP4-201ENST00000359001 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
KCNIP4-201ENST00000359001 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
KCNIP4-201ENST00000359001 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
KCNIP4-201ENST00000359001 MT3P25713 68 aa1.85□□□□□ -2.11
KCNIP4-201ENST00000359001 PRM1P04553 51 aa1.82□□□□□ -2.12
KCNIP4-201ENST00000359001 NEBP20929 6669 aa1.73□□□□□ -2.13
KCNIP4-201ENST00000359001 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
KCNIP4-201ENST00000359001 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
KCNIP4-201ENST00000359001 MT4P47944 62 aa1.7□□□□□ -2.14
KCNIP4-201ENST00000359001 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.15
KCNIP4-201ENST00000359001 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
KCNIP4-201ENST00000359001 LCE1FQ5T754 118 aa1.55□□□□□ -2.16
KCNIP4-201ENST00000359001 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
KCNIP4-201ENST00000359001 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
KCNIP4-201ENST00000359001 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
KCNIP4-201ENST00000359001 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
KCNIP4-201ENST00000359001 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
KCNIP4-201ENST00000359001 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
KCNIP4-201ENST00000359001 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
KCNIP4-201ENST00000359001 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
KCNIP4-201ENST00000359001 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
KCNIP4-201ENST00000359001 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 75.3 ms