RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 MT1EP04732 61 aa4.78□□□□□ -1.64
APP-205ENST00000358918 KRTAP9-2Q9BYQ4 174 aa4.77□□□□□ -1.65
APP-205ENST00000358918 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
APP-205ENST00000358918 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
APP-205ENST00000358918 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
APP-205ENST00000358918 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
APP-205ENST00000358918 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
APP-205ENST00000358918 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
APP-205ENST00000358918 MT1GP13640 62 aa4.53□□□□□ -1.68
APP-205ENST00000358918 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
APP-205ENST00000358918 CRCT1Q9UGL9 99 aa4.53□□□□□ -1.68
APP-205ENST00000358918 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
APP-205ENST00000358918 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
APP-205ENST00000358918 MT1MQ8N339 61 aa4.48□□□□□ -1.69
APP-205ENST00000358918 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
APP-205ENST00000358918 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.7
APP-205ENST00000358918 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
APP-205ENST00000358918 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
APP-205ENST00000358918 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
APP-205ENST00000358918 MDN1Q9NU22 5596 aa4.28□□□□□ -1.72
APP-205ENST00000358918 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
APP-205ENST00000358918 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
APP-205ENST00000358918 MT1AP04731 61 aa4.25□□□□□ -1.73
APP-205ENST00000358918 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
APP-205ENST00000358918 SPRR2EP22531 72 aa4.2□□□□□ -1.74
APP-205ENST00000358918 SPRR2BP35325 72 aa4.2□□□□□ -1.74
APP-205ENST00000358918 SPRR2AP35326 72 aa4.2□□□□□ -1.74
APP-205ENST00000358918 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
APP-205ENST00000358918 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
APP-205ENST00000358918 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
APP-205ENST00000358918 PRM1P04553 51 aa4.14□□□□□ -1.75
APP-205ENST00000358918 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
APP-205ENST00000358918 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
APP-205ENST00000358918 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
APP-205ENST00000358918 SPRR2DP22532 72 aa4.03□□□□□ -1.76
APP-205ENST00000358918 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
APP-205ENST00000358918 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.78
APP-205ENST00000358918 NEBP20929 6669 aa3.8□□□□□ -1.8
APP-205ENST00000358918 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
APP-205ENST00000358918 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
APP-205ENST00000358918 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
APP-205ENST00000358918 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
APP-205ENST00000358918 MT3P25713 68 aa3.61□□□□□ -1.83
APP-205ENST00000358918 MT4P47944 62 aa3.56□□□□□ -1.84
APP-205ENST00000358918 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
APP-205ENST00000358918 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
APP-205ENST00000358918 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
APP-205ENST00000358918 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
APP-205ENST00000358918 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
APP-205ENST00000358918 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
APP-205ENST00000358918 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
APP-205ENST00000358918 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
APP-205ENST00000358918 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
APP-205ENST00000358918 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
APP-205ENST00000358918 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
APP-205ENST00000358918 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
APP-205ENST00000358918 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
APP-205ENST00000358918 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
APP-205ENST00000358918 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
APP-205ENST00000358918 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
APP-205ENST00000358918 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
APP-205ENST00000358918 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
APP-205ENST00000358918 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
APP-205ENST00000358918 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
APP-205ENST00000358918 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
APP-205ENST00000358918 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
APP-205ENST00000358918 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
APP-205ENST00000358918 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
APP-205ENST00000358918 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
APP-205ENST00000358918 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
APP-205ENST00000358918 KRTAP9-9Q9BYP9 154 aa2.44□□□□□ -2.02
APP-205ENST00000358918 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
APP-205ENST00000358918 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
APP-205ENST00000358918 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
APP-205ENST00000358918 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
APP-205ENST00000358918 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
APP-205ENST00000358918 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 191.6 ms