RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 KRTAP9-9Q9BYP9 154 aa5.78□□□□□ -1.48
TPM1-206ENST00000358278 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
TPM1-206ENST00000358278 MUC12Q9UKN1 5478 aa5.76□□□□□ -1.49
TPM1-206ENST00000358278 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
TPM1-206ENST00000358278 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
TPM1-206ENST00000358278 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
TPM1-206ENST00000358278 MDN1Q9NU22 5596 aa5.67□□□□□ -1.5
TPM1-206ENST00000358278 SPRR2EP22531 72 aa5.64□□□□□ -1.51
TPM1-206ENST00000358278 SPRR2BP35325 72 aa5.64□□□□□ -1.51
TPM1-206ENST00000358278 SPRR2AP35326 72 aa5.64□□□□□ -1.51
TPM1-206ENST00000358278 MT1EP04732 61 aa5.62□□□□□ -1.51
TPM1-206ENST00000358278 NEBP20929 6669 aa5.61□□□□□ -1.51
TPM1-206ENST00000358278 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
TPM1-206ENST00000358278 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
TPM1-206ENST00000358278 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
TPM1-206ENST00000358278 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
TPM1-206ENST00000358278 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
TPM1-206ENST00000358278 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
TPM1-206ENST00000358278 SPRR2DP22532 72 aa5.45□□□□□ -1.54
TPM1-206ENST00000358278 MT1LQ93083 61 aa5.44□□□□□ -1.54
TPM1-206ENST00000358278 MT1GP13640 62 aa5.4□□□□□ -1.54
TPM1-206ENST00000358278 KRTAP20-1Q3LI63 56 aa5.33□□□□□ -1.56
TPM1-206ENST00000358278 MT1MQ8N339 61 aa5.32□□□□□ -1.56
TPM1-206ENST00000358278 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
TPM1-206ENST00000358278 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
TPM1-206ENST00000358278 DSTQ03001 7570 aaKnown RBP5.25□□□□□ -1.57
TPM1-206ENST00000358278 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
TPM1-206ENST00000358278 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
TPM1-206ENST00000358278 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
TPM1-206ENST00000358278 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
TPM1-206ENST00000358278 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.58
TPM1-206ENST00000358278 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
TPM1-206ENST00000358278 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
TPM1-206ENST00000358278 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
TPM1-206ENST00000358278 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
TPM1-206ENST00000358278 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
TPM1-206ENST00000358278 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
TPM1-206ENST00000358278 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
TPM1-206ENST00000358278 MT4P47944 62 aa4.73□□□□□ -1.65
TPM1-206ENST00000358278 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
TPM1-206ENST00000358278 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
TPM1-206ENST00000358278 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
TPM1-206ENST00000358278 MT1AP04731 61 aa4.63□□□□□ -1.67
TPM1-206ENST00000358278 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
TPM1-206ENST00000358278 MT3P25713 68 aa4.6□□□□□ -1.67
TPM1-206ENST00000358278 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
TPM1-206ENST00000358278 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
TPM1-206ENST00000358278 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
TPM1-206ENST00000358278 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
TPM1-206ENST00000358278 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
TPM1-206ENST00000358278 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
TPM1-206ENST00000358278 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
TPM1-206ENST00000358278 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
TPM1-206ENST00000358278 GPR98Q8WXG9 6306 aa4.16□□□□□ -1.74
TPM1-206ENST00000358278 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
TPM1-206ENST00000358278 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
TPM1-206ENST00000358278 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
TPM1-206ENST00000358278 INE1O15225 51 aa3.87□□□□□ -1.79
TPM1-206ENST00000358278 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
TPM1-206ENST00000358278 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
TPM1-206ENST00000358278 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
TPM1-206ENST00000358278 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
TPM1-206ENST00000358278 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
TPM1-206ENST00000358278 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
TPM1-206ENST00000358278 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
TPM1-206ENST00000358278 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
TPM1-206ENST00000358278 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
TPM1-206ENST00000358278 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
TPM1-206ENST00000358278 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
TPM1-206ENST00000358278 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
TPM1-206ENST00000358278 PRM1P04553 51 aa3.03□□□□□ -1.92
TPM1-206ENST00000358278 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
TPM1-206ENST00000358278 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
TPM1-206ENST00000358278 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
TPM1-206ENST00000358278 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
TPM1-206ENST00000358278 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
TPM1-206ENST00000358278 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 90.8 ms