RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
RNF38-204ENST00000357058 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
RNF38-204ENST00000357058 LCE2DQ5TA82 110 aaPredicted RBP6.63□□□□□ -1.35
RNF38-204ENST00000357058 MT1MQ8N339 61 aa6.52□□□□□ -1.37
RNF38-204ENST00000357058 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
RNF38-204ENST00000357058 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
RNF38-204ENST00000357058 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
RNF38-204ENST00000357058 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
RNF38-204ENST00000357058 LCE3DQ9BYE3 92 aa6.28□□□□□ -1.4
RNF38-204ENST00000357058 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
RNF38-204ENST00000357058 LCE3EQ5T5B0 92 aa6.16□□□□□ -1.42
RNF38-204ENST00000357058 USH2AO75445 5202 aa6.12□□□□□ -1.43
RNF38-204ENST00000357058 MT4P47944 62 aa6□□□□□ -1.45
RNF38-204ENST00000357058 MT3P25713 68 aa5.99□□□□□ -1.45
RNF38-204ENST00000357058 KRTAP9-6A8MVA2 160 aa5.97□□□□□ -1.45
RNF38-204ENST00000357058 MT1AP04731 61 aa5.96□□□□□ -1.46
RNF38-204ENST00000357058 KRTAP2-3P0C7H8 128 aa5.94□□□□□ -1.46
RNF38-204ENST00000357058 KRTAP2-4Q9BYR9 128 aa5.94□□□□□ -1.46
RNF38-204ENST00000357058 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
RNF38-204ENST00000357058 LCE5AQ5TCM9 118 aa5.92□□□□□ -1.46
RNF38-204ENST00000357058 SYNE1Q8NF91 8797 aaKnown RBP5.91□□□□□ -1.46
RNF38-204ENST00000357058 KRTAP6-3Q3LI67 103 aa5.89□□□□□ -1.47
RNF38-204ENST00000357058 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
RNF38-204ENST00000357058 LCE1AQ5T7P2 110 aa5.88□□□□□ -1.47
RNF38-204ENST00000357058 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
RNF38-204ENST00000357058 KMT2DO14686 5537 aa5.82□□□□□ -1.48
RNF38-204ENST00000357058 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
RNF38-204ENST00000357058 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
RNF38-204ENST00000357058 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
RNF38-204ENST00000357058 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
RNF38-204ENST00000357058 PRM1P04553 51 aa5.62□□□□□ -1.51
RNF38-204ENST00000357058 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
RNF38-204ENST00000357058 KRTAP20-1Q3LI63 56 aa5.59□□□□□ -1.51
RNF38-204ENST00000357058 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
RNF38-204ENST00000357058 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
RNF38-204ENST00000357058 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
RNF38-204ENST00000357058 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
RNF38-204ENST00000357058 DSTQ03001 7570 aaKnown RBP5.51□□□□□ -1.53
RNF38-204ENST00000357058 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
RNF38-204ENST00000357058 LCE1BQ5T7P3 118 aa5.49□□□□□ -1.53
RNF38-204ENST00000357058 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
RNF38-204ENST00000357058 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
RNF38-204ENST00000357058 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
RNF38-204ENST00000357058 KRTAP2-2Q9BYT5 123 aa5.37□□□□□ -1.55
RNF38-204ENST00000357058 NEBP20929 6669 aa5.09□□□□□ -1.59
RNF38-204ENST00000357058 MDN1Q9NU22 5596 aa4.94□□□□□ -1.62
RNF38-204ENST00000357058 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
RNF38-204ENST00000357058 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
RNF38-204ENST00000357058 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
RNF38-204ENST00000357058 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
RNF38-204ENST00000357058 LCE1CQ5T751 118 aa4.45□□□□□ -1.7
RNF38-204ENST00000357058 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
RNF38-204ENST00000357058 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
RNF38-204ENST00000357058 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
RNF38-204ENST00000357058 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
RNF38-204ENST00000357058 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
RNF38-204ENST00000357058 MUC19Q7Z5P9 8384 aa4.1□□□□□ -1.75
RNF38-204ENST00000357058 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
RNF38-204ENST00000357058 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
RNF38-204ENST00000357058 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
RNF38-204ENST00000357058 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
RNF38-204ENST00000357058 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
RNF38-204ENST00000357058 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
RNF38-204ENST00000357058 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
RNF38-204ENST00000357058 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
RNF38-204ENST00000357058 KRTAP5-8O75690 187 aa3.65□□□□□ -1.82
RNF38-204ENST00000357058 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
RNF38-204ENST00000357058 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.86
RNF38-204ENST00000357058 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
RNF38-204ENST00000357058 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
RNF38-204ENST00000357058 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
RNF38-204ENST00000357058 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
RNF38-204ENST00000357058 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
RNF38-204ENST00000357058 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
RNF38-204ENST00000357058 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
RNF38-204ENST00000357058 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
RNF38-204ENST00000357058 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms