RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
ATN1-201ENST00000356654 SPRR2DP22532 72 aa4.64□□□□□ -1.67
ATN1-201ENST00000356654 KRTAP9-2Q9BYQ4 174 aa4.62□□□□□ -1.67
ATN1-201ENST00000356654 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
ATN1-201ENST00000356654 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
ATN1-201ENST00000356654 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
ATN1-201ENST00000356654 USH2AO75445 5202 aa4.53□□□□□ -1.68
ATN1-201ENST00000356654 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
ATN1-201ENST00000356654 MT1MQ8N339 61 aa4.53□□□□□ -1.68
ATN1-201ENST00000356654 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
ATN1-201ENST00000356654 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
ATN1-201ENST00000356654 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
ATN1-201ENST00000356654 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
ATN1-201ENST00000356654 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
ATN1-201ENST00000356654 KMT2DO14686 5537 aa4.35□□□□□ -1.71
ATN1-201ENST00000356654 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
ATN1-201ENST00000356654 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
ATN1-201ENST00000356654 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
ATN1-201ENST00000356654 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
ATN1-201ENST00000356654 MT4P47944 62 aa4.19□□□□□ -1.74
ATN1-201ENST00000356654 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
ATN1-201ENST00000356654 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
ATN1-201ENST00000356654 MT3P25713 68 aa4.13□□□□□ -1.75
ATN1-201ENST00000356654 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
ATN1-201ENST00000356654 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
ATN1-201ENST00000356654 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
ATN1-201ENST00000356654 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
ATN1-201ENST00000356654 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
ATN1-201ENST00000356654 MT1AP04731 61 aa4.11□□□□□ -1.75
ATN1-201ENST00000356654 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
ATN1-201ENST00000356654 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
ATN1-201ENST00000356654 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
ATN1-201ENST00000356654 KRTAP9-7A8MTY7 169 aa4.03□□□□□ -1.76
ATN1-201ENST00000356654 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
ATN1-201ENST00000356654 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
ATN1-201ENST00000356654 PRM1P04553 51 aa3.92□□□□□ -1.78
ATN1-201ENST00000356654 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
ATN1-201ENST00000356654 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
ATN1-201ENST00000356654 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
ATN1-201ENST00000356654 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
ATN1-201ENST00000356654 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
ATN1-201ENST00000356654 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
ATN1-201ENST00000356654 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
ATN1-201ENST00000356654 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
ATN1-201ENST00000356654 LCE4AQ5TA78 99 aa3.65□□□□□ -1.82
ATN1-201ENST00000356654 NEBP20929 6669 aa3.58□□□□□ -1.84
ATN1-201ENST00000356654 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
ATN1-201ENST00000356654 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
ATN1-201ENST00000356654 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
ATN1-201ENST00000356654 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
ATN1-201ENST00000356654 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
ATN1-201ENST00000356654 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
ATN1-201ENST00000356654 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
ATN1-201ENST00000356654 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
ATN1-201ENST00000356654 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
ATN1-201ENST00000356654 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
ATN1-201ENST00000356654 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
ATN1-201ENST00000356654 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
ATN1-201ENST00000356654 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.93
ATN1-201ENST00000356654 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
ATN1-201ENST00000356654 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
ATN1-201ENST00000356654 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
ATN1-201ENST00000356654 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
ATN1-201ENST00000356654 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
ATN1-201ENST00000356654 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
ATN1-201ENST00000356654 KRTAP5-8O75690 187 aa2.57□□□□□ -2
ATN1-201ENST00000356654 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
ATN1-201ENST00000356654 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
ATN1-201ENST00000356654 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
ATN1-201ENST00000356654 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
ATN1-201ENST00000356654 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
ATN1-201ENST00000356654 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
ATN1-201ENST00000356654 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
ATN1-201ENST00000356654 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
ATN1-201ENST00000356654 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
ATN1-201ENST00000356654 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
ATN1-201ENST00000356654 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 104.1 ms