RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 KRTAP4-8Q9BYQ9 185 aa1.79□□□□□ -2.12
PTPRD-202ENST00000356435 MT4P47944 62 aa1.79□□□□□ -2.12
PTPRD-202ENST00000356435 MT1LQ93083 61 aa1.77□□□□□ -2.13
PTPRD-202ENST00000356435 MT1EP04732 61 aa1.75□□□□□ -2.13
PTPRD-202ENST00000356435 LPAP08519 4548 aa1.74□□□□□ -2.13
PTPRD-202ENST00000356435 USH2AO75445 5202 aa1.74□□□□□ -2.13
PTPRD-202ENST00000356435 KRTAP9-2Q9BYQ4 174 aa1.73□□□□□ -2.13
PTPRD-202ENST00000356435 MT1MQ8N339 61 aa1.73□□□□□ -2.13
PTPRD-202ENST00000356435 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
PTPRD-202ENST00000356435 KRTAP9-6A0A140TA67 174 aa1.72□□□□□ -2.13
PTPRD-202ENST00000356435 LCE1DQ5T752 114 aa1.72□□□□□ -2.13
PTPRD-202ENST00000356435 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
PTPRD-202ENST00000356435 KRTAP19-6Q3LI70 58 aa1.7□□□□□ -2.14
PTPRD-202ENST00000356435 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
PTPRD-202ENST00000356435 KRTAP9-6A8MVA2 160 aa1.7□□□□□ -2.14
PTPRD-202ENST00000356435 MUC2Q02817 5179 aa1.69□□□□□ -2.14
PTPRD-202ENST00000356435 KRTAP4-7Q9BYR0 210 aa1.68□□□□□ -2.14
PTPRD-202ENST00000356435 PRM1P04553 51 aa1.67□□□□□ -2.14
PTPRD-202ENST00000356435 LCE5AQ5TCM9 118 aa1.63□□□□□ -2.15
PTPRD-202ENST00000356435 MT1AP04731 61 aa1.63□□□□□ -2.15
PTPRD-202ENST00000356435 LCE1AQ5T7P2 110 aa1.63□□□□□ -2.15
PTPRD-202ENST00000356435 LOC100996750A0A140TA64 210 aa1.61□□□□□ -2.15
PTPRD-202ENST00000356435 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
PTPRD-202ENST00000356435 KRTAP9-7A8MTY7 169 aa1.61□□□□□ -2.15
PTPRD-202ENST00000356435 LCE4AQ5TA78 99 aa1.58□□□□□ -2.16
PTPRD-202ENST00000356435 SYNE2Q8WXH0 6885 aaKnown RBP1.58□□□□□ -2.16
PTPRD-202ENST00000356435 SSPOA2VEC9 5147 aa1.58□□□□□ -2.16
PTPRD-202ENST00000356435 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
PTPRD-202ENST00000356435 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
PTPRD-202ENST00000356435 KRTAP2-2Q9BYT5 123 aa1.55□□□□□ -2.16
PTPRD-202ENST00000356435 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
PTPRD-202ENST00000356435 LCE1EQ5T753 118 aa1.54□□□□□ -2.16
PTPRD-202ENST00000356435 LCE1FQ5T754 118 aa1.54□□□□□ -2.16
PTPRD-202ENST00000356435 LCE2AQ5TA79 106 aaPredicted RBP1.53□□□□□ -2.16
PTPRD-202ENST00000356435 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
PTPRD-202ENST00000356435 OBSCNQ5VST9 7968 aa1.51□□□□□ -2.17
PTPRD-202ENST00000356435 KRTAP4-9Q9BYQ8 210 aa1.5□□□□□ -2.17
PTPRD-202ENST00000356435 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
PTPRD-202ENST00000356435 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.49□□□□□ -2.17
PTPRD-202ENST00000356435 KRTAP9-4Q9BYQ2 154 aa1.49□□□□□ -2.17
PTPRD-202ENST00000356435 KMT2DO14686 5537 aa1.47□□□□□ -2.17
PTPRD-202ENST00000356435 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
PTPRD-202ENST00000356435 FSIP2Q5CZC0 6907 aa1.44□□□□□ -2.18
PTPRD-202ENST00000356435 KRTAP9-9Q9BYP9 154 aa1.44□□□□□ -2.18
PTPRD-202ENST00000356435 MDN1Q9NU22 5596 aa1.42□□□□□ -2.18
PTPRD-202ENST00000356435 NEBP20929 6669 aa1.4□□□□□ -2.19
PTPRD-202ENST00000356435 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.19
PTPRD-202ENST00000356435 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
PTPRD-202ENST00000356435 KRTAP5-5Q701N2 237 aaPredicted RBP1.37□□□□□ -2.19
PTPRD-202ENST00000356435 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
PTPRD-202ENST00000356435 KRTAP4-6Q9BYQ5 205 aa1.34□□□□□ -2.2
PTPRD-202ENST00000356435 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
PTPRD-202ENST00000356435 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
PTPRD-202ENST00000356435 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
PTPRD-202ENST00000356435 KRTAP5-9P26371 169 aa1.26□□□□□ -2.21
PTPRD-202ENST00000356435 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
PTPRD-202ENST00000356435 HMCN1Q96RW7 5635 aa1.2□□□□□ -2.22
PTPRD-202ENST00000356435 KRTAP4-11Q9BYQ6 195 aa1.18□□□□□ -2.22
PTPRD-202ENST00000356435 KRTAP5-4Q6L8H1 288 aa1.17□□□□□ -2.22
PTPRD-202ENST00000356435 KRTAP4-12Q9BQ66 201 aa1.13□□□□□ -2.23
PTPRD-202ENST00000356435 KRTAP4-4Q9BYR3 166 aa1.13□□□□□ -2.23
PTPRD-202ENST00000356435 KRTAP4-2Q9BYR5 136 aa1.13□□□□□ -2.23
PTPRD-202ENST00000356435 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
PTPRD-202ENST00000356435 KRTAP5-3Q6L8H2 238 aa1.11□□□□□ -2.23
PTPRD-202ENST00000356435 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
PTPRD-202ENST00000356435 KRTAP5-2Q701N4 177 aa1.05□□□□□ -2.24
PTPRD-202ENST00000356435 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
PTPRD-202ENST00000356435 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
PTPRD-202ENST00000356435 KRTAP5-1Q6L8H4 278 aa1□□□□□ -2.25
PTPRD-202ENST00000356435 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.96□□□□□ -2.26
PTPRD-202ENST00000356435 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
PTPRD-202ENST00000356435 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
PTPRD-202ENST00000356435 KRTAP5-8O75690 187 aa0.89□□□□□ -2.27
PTPRD-202ENST00000356435 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
PTPRD-202ENST00000356435 KRTAP5-11Q6L8G4 156 aa0.85□□□□□ -2.27
PTPRD-202ENST00000356435 KRTAP5-7Q6L8G8 165 aa0.84□□□□□ -2.28
PTPRD-202ENST00000356435 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 118.2 ms