RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
RXRA-201ENST00000356384 PRM1P04553 51 aa5.03□□□□□ -1.6
RXRA-201ENST00000356384 MT1EP04732 61 aa5.03□□□□□ -1.6
RXRA-201ENST00000356384 MT3P25713 68 aa5.02□□□□□ -1.61
RXRA-201ENST00000356384 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
RXRA-201ENST00000356384 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.62
RXRA-201ENST00000356384 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
RXRA-201ENST00000356384 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
RXRA-201ENST00000356384 LCE1BQ5T7P3 118 aa4.95□□□□□ -1.62
RXRA-201ENST00000356384 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
RXRA-201ENST00000356384 MT1MQ8N339 61 aa4.92□□□□□ -1.62
RXRA-201ENST00000356384 MUC2Q02817 5179 aa4.91□□□□□ -1.62
RXRA-201ENST00000356384 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
RXRA-201ENST00000356384 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
RXRA-201ENST00000356384 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
RXRA-201ENST00000356384 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
RXRA-201ENST00000356384 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
RXRA-201ENST00000356384 SYNE2Q8WXH0 6885 aaKnown RBP4.69□□□□□ -1.66
RXRA-201ENST00000356384 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
RXRA-201ENST00000356384 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
RXRA-201ENST00000356384 MT1AP04731 61 aa4.6□□□□□ -1.67
RXRA-201ENST00000356384 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
RXRA-201ENST00000356384 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
RXRA-201ENST00000356384 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
RXRA-201ENST00000356384 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
RXRA-201ENST00000356384 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
RXRA-201ENST00000356384 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
RXRA-201ENST00000356384 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
RXRA-201ENST00000356384 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
RXRA-201ENST00000356384 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
RXRA-201ENST00000356384 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
RXRA-201ENST00000356384 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
RXRA-201ENST00000356384 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
RXRA-201ENST00000356384 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
RXRA-201ENST00000356384 USH2AO75445 5202 aa4.28□□□□□ -1.72
RXRA-201ENST00000356384 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
RXRA-201ENST00000356384 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
RXRA-201ENST00000356384 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
RXRA-201ENST00000356384 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
RXRA-201ENST00000356384 KMT2DO14686 5537 aa4.16□□□□□ -1.74
RXRA-201ENST00000356384 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
RXRA-201ENST00000356384 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
RXRA-201ENST00000356384 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
RXRA-201ENST00000356384 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
RXRA-201ENST00000356384 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
RXRA-201ENST00000356384 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
RXRA-201ENST00000356384 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
RXRA-201ENST00000356384 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
RXRA-201ENST00000356384 NEBP20929 6669 aa3.76□□□□□ -1.81
RXRA-201ENST00000356384 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
RXRA-201ENST00000356384 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
RXRA-201ENST00000356384 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
RXRA-201ENST00000356384 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
RXRA-201ENST00000356384 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
RXRA-201ENST00000356384 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
RXRA-201ENST00000356384 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
RXRA-201ENST00000356384 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
RXRA-201ENST00000356384 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
RXRA-201ENST00000356384 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
RXRA-201ENST00000356384 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
RXRA-201ENST00000356384 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
RXRA-201ENST00000356384 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
RXRA-201ENST00000356384 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
RXRA-201ENST00000356384 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
RXRA-201ENST00000356384 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
RXRA-201ENST00000356384 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
RXRA-201ENST00000356384 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
RXRA-201ENST00000356384 PHGR1C9JFL3 82 aa2.56□□□□□ -2
RXRA-201ENST00000356384 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
RXRA-201ENST00000356384 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
RXRA-201ENST00000356384 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
RXRA-201ENST00000356384 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
RXRA-201ENST00000356384 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
RXRA-201ENST00000356384 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
RXRA-201ENST00000356384 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
RXRA-201ENST00000356384 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
RXRA-201ENST00000356384 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
RXRA-201ENST00000356384 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 125.3 ms