RNA–Protein interactions for RNA: ENST00000355946.6

SH3PXD2A-202, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SH3PXD2A, Length 11,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-202ENST00000355946 KRTAP4-8A0A0G2JLE6 195 aa2.74□□□□□ -1.97
SH3PXD2A-202ENST00000355946 KRTAP4-8Q9BYQ9 185 aa2.74□□□□□ -1.97
SH3PXD2A-202ENST00000355946 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
SH3PXD2A-202ENST00000355946 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
SH3PXD2A-202ENST00000355946 LCE2AQ5TA79 106 aaPredicted RBP2.69□□□□□ -1.98
SH3PXD2A-202ENST00000355946 MT1LQ93083 61 aa2.67□□□□□ -1.98
SH3PXD2A-202ENST00000355946 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.99
SH3PXD2A-202ENST00000355946 PRM1P04553 51 aa2.64□□□□□ -1.99
SH3PXD2A-202ENST00000355946 KRTAP9-2Q9BYQ4 174 aa2.62□□□□□ -1.99
SH3PXD2A-202ENST00000355946 USH2AO75445 5202 aa2.61□□□□□ -1.99
SH3PXD2A-202ENST00000355946 MT1EP04732 61 aa2.6□□□□□ -1.99
SH3PXD2A-202ENST00000355946 LCE5AQ5TCM9 118 aa2.59□□□□□ -1.99
SH3PXD2A-202ENST00000355946 MT1MQ8N339 61 aa2.58□□□□□ -2
SH3PXD2A-202ENST00000355946 KRTAP4-7Q9BYR0 210 aa2.58□□□□□ -2
SH3PXD2A-202ENST00000355946 KRTAP9-6A0A140TA67 174 aa2.56□□□□□ -2
SH3PXD2A-202ENST00000355946 KRTAP19-6Q3LI70 58 aa2.54□□□□□ -2
SH3PXD2A-202ENST00000355946 LOC100996750A0A140TA64 210 aa2.51□□□□□ -2.01
SH3PXD2A-202ENST00000355946 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
SH3PXD2A-202ENST00000355946 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
SH3PXD2A-202ENST00000355946 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
SH3PXD2A-202ENST00000355946 LCE1AQ5T7P2 110 aa2.5□□□□□ -2.01
SH3PXD2A-202ENST00000355946 KMT2DO14686 5537 aa2.48□□□□□ -2.01
SH3PXD2A-202ENST00000355946 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.01
SH3PXD2A-202ENST00000355946 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
SH3PXD2A-202ENST00000355946 KRTAP19-7Q3SYF9 63 aa2.43□□□□□ -2.02
SH3PXD2A-202ENST00000355946 MT1AP04731 61 aa2.43□□□□□ -2.02
SH3PXD2A-202ENST00000355946 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
SH3PXD2A-202ENST00000355946 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
SH3PXD2A-202ENST00000355946 KRTAP9-7A8MTY7 169 aa2.41□□□□□ -2.02
SH3PXD2A-202ENST00000355946 KRTAP4-9Q9BYQ8 210 aa2.37□□□□□ -2.03
SH3PXD2A-202ENST00000355946 LCE4AQ5TA78 99 aa2.37□□□□□ -2.03
SH3PXD2A-202ENST00000355946 FCGBPQ9Y6R7 5405 aaPredicted RBP2.37□□□□□ -2.03
SH3PXD2A-202ENST00000355946 DSTQ03001 7570 aaKnown RBP2.36□□□□□ -2.03
SH3PXD2A-202ENST00000355946 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
SH3PXD2A-202ENST00000355946 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
SH3PXD2A-202ENST00000355946 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
SH3PXD2A-202ENST00000355946 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
SH3PXD2A-202ENST00000355946 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
SH3PXD2A-202ENST00000355946 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
SH3PXD2A-202ENST00000355946 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
SH3PXD2A-202ENST00000355946 SYNE2Q8WXH0 6885 aaKnown RBP2.28□□□□□ -2.04
SH3PXD2A-202ENST00000355946 KRTAP2-2Q9BYT5 123 aa2.28□□□□□ -2.05
SH3PXD2A-202ENST00000355946 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
SH3PXD2A-202ENST00000355946 MACF1Q9UPN3 7388 aaKnown RBP2.23□□□□□ -2.05
SH3PXD2A-202ENST00000355946 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.23□□□□□ -2.05
SH3PXD2A-202ENST00000355946 KRTAP9-4Q9BYQ2 154 aa2.22□□□□□ -2.05
SH3PXD2A-202ENST00000355946 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
SH3PXD2A-202ENST00000355946 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
SH3PXD2A-202ENST00000355946 KRTAP5-9P26371 169 aa2.02□□□□□ -2.09
SH3PXD2A-202ENST00000355946 NEBP20929 6669 aa1.97□□□□□ -2.09
SH3PXD2A-202ENST00000355946 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
SH3PXD2A-202ENST00000355946 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
SH3PXD2A-202ENST00000355946 KRTAP4-6Q9BYQ5 205 aa1.9□□□□□ -2.11
SH3PXD2A-202ENST00000355946 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
SH3PXD2A-202ENST00000355946 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SH3PXD2A-202ENST00000355946 KRTAP4-12Q9BQ66 201 aa1.77□□□□□ -2.13
SH3PXD2A-202ENST00000355946 KRTAP4-2Q9BYR5 136 aa1.77□□□□□ -2.13
SH3PXD2A-202ENST00000355946 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
SH3PXD2A-202ENST00000355946 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
SH3PXD2A-202ENST00000355946 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
SH3PXD2A-202ENST00000355946 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
SH3PXD2A-202ENST00000355946 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
SH3PXD2A-202ENST00000355946 KRTAP5-3Q6L8H2 238 aa1.51□□□□□ -2.17
SH3PXD2A-202ENST00000355946 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
SH3PXD2A-202ENST00000355946 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
SH3PXD2A-202ENST00000355946 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
SH3PXD2A-202ENST00000355946 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
SH3PXD2A-202ENST00000355946 KRTAP5-1Q6L8H4 278 aa1.33□□□□□ -2.2
SH3PXD2A-202ENST00000355946 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
SH3PXD2A-202ENST00000355946 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
SH3PXD2A-202ENST00000355946 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
SH3PXD2A-202ENST00000355946 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
SH3PXD2A-202ENST00000355946 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.22
SH3PXD2A-202ENST00000355946 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
SH3PXD2A-202ENST00000355946 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.1□□□□□ -2.23
SH3PXD2A-202ENST00000355946 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
SH3PXD2A-202ENST00000355946 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 21.9 ms