RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 MT1GP13640 62 aa4.21□□□□□ -1.74
RNF220-202ENST00000355387 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
RNF220-202ENST00000355387 MT1MQ8N339 61 aa4.18□□□□□ -1.74
RNF220-202ENST00000355387 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
RNF220-202ENST00000355387 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
RNF220-202ENST00000355387 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
RNF220-202ENST00000355387 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
RNF220-202ENST00000355387 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
RNF220-202ENST00000355387 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
RNF220-202ENST00000355387 MT1AP04731 61 aa3.89□□□□□ -1.79
RNF220-202ENST00000355387 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
RNF220-202ENST00000355387 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
RNF220-202ENST00000355387 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
RNF220-202ENST00000355387 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
RNF220-202ENST00000355387 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
RNF220-202ENST00000355387 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.81
RNF220-202ENST00000355387 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
RNF220-202ENST00000355387 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
RNF220-202ENST00000355387 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
RNF220-202ENST00000355387 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
RNF220-202ENST00000355387 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
RNF220-202ENST00000355387 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
RNF220-202ENST00000355387 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
RNF220-202ENST00000355387 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
RNF220-202ENST00000355387 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.82
RNF220-202ENST00000355387 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
RNF220-202ENST00000355387 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
RNF220-202ENST00000355387 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
RNF220-202ENST00000355387 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
RNF220-202ENST00000355387 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
RNF220-202ENST00000355387 SPRR2EP22531 72 aa3.57□□□□□ -1.84
RNF220-202ENST00000355387 SPRR2BP35325 72 aa3.57□□□□□ -1.84
RNF220-202ENST00000355387 SPRR2AP35326 72 aa3.57□□□□□ -1.84
RNF220-202ENST00000355387 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
RNF220-202ENST00000355387 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
RNF220-202ENST00000355387 PRM1P04553 51 aa3.5□□□□□ -1.85
RNF220-202ENST00000355387 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
RNF220-202ENST00000355387 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
RNF220-202ENST00000355387 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
RNF220-202ENST00000355387 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
RNF220-202ENST00000355387 SPRR2DP22532 72 aa3.42□□□□□ -1.86
RNF220-202ENST00000355387 MT3P25713 68 aa3.42□□□□□ -1.86
RNF220-202ENST00000355387 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
RNF220-202ENST00000355387 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
RNF220-202ENST00000355387 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
RNF220-202ENST00000355387 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
RNF220-202ENST00000355387 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
RNF220-202ENST00000355387 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
RNF220-202ENST00000355387 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
RNF220-202ENST00000355387 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
RNF220-202ENST00000355387 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
RNF220-202ENST00000355387 NEBP20929 6669 aa3.01□□□□□ -1.93
RNF220-202ENST00000355387 MT4P47944 62 aa2.93□□□□□ -1.94
RNF220-202ENST00000355387 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
RNF220-202ENST00000355387 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
RNF220-202ENST00000355387 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
RNF220-202ENST00000355387 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
RNF220-202ENST00000355387 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
RNF220-202ENST00000355387 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
RNF220-202ENST00000355387 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
RNF220-202ENST00000355387 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
RNF220-202ENST00000355387 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
RNF220-202ENST00000355387 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
RNF220-202ENST00000355387 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
RNF220-202ENST00000355387 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
RNF220-202ENST00000355387 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
RNF220-202ENST00000355387 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
RNF220-202ENST00000355387 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
RNF220-202ENST00000355387 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
RNF220-202ENST00000355387 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
RNF220-202ENST00000355387 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
RNF220-202ENST00000355387 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
RNF220-202ENST00000355387 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
RNF220-202ENST00000355387 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
RNF220-202ENST00000355387 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
RNF220-202ENST00000355387 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
RNF220-202ENST00000355387 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 70.1 ms