RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 LCE2AQ5TA79 106 aaPredicted RBP5.01□□□□□ -1.61
SHTN1-202ENST00000355371 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
SHTN1-202ENST00000355371 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
SHTN1-202ENST00000355371 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
SHTN1-202ENST00000355371 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
SHTN1-202ENST00000355371 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
SHTN1-202ENST00000355371 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
SHTN1-202ENST00000355371 MT4P47944 62 aa4.86□□□□□ -1.63
SHTN1-202ENST00000355371 MT1AP04731 61 aa4.83□□□□□ -1.64
SHTN1-202ENST00000355371 PRM1P04553 51 aa4.81□□□□□ -1.64
SHTN1-202ENST00000355371 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
SHTN1-202ENST00000355371 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
SHTN1-202ENST00000355371 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
SHTN1-202ENST00000355371 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
SHTN1-202ENST00000355371 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
SHTN1-202ENST00000355371 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
SHTN1-202ENST00000355371 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
SHTN1-202ENST00000355371 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.67
SHTN1-202ENST00000355371 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
SHTN1-202ENST00000355371 FSIP2Q5CZC0 6907 aa4.59□□□□□ -1.67
SHTN1-202ENST00000355371 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
SHTN1-202ENST00000355371 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
SHTN1-202ENST00000355371 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
SHTN1-202ENST00000355371 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
SHTN1-202ENST00000355371 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
SHTN1-202ENST00000355371 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
SHTN1-202ENST00000355371 MUC2Q02817 5179 aa4.48□□□□□ -1.69
SHTN1-202ENST00000355371 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
SHTN1-202ENST00000355371 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
SHTN1-202ENST00000355371 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
SHTN1-202ENST00000355371 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
SHTN1-202ENST00000355371 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
SHTN1-202ENST00000355371 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
SHTN1-202ENST00000355371 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
SHTN1-202ENST00000355371 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
SHTN1-202ENST00000355371 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
SHTN1-202ENST00000355371 USH2AO75445 5202 aa4.08□□□□□ -1.76
SHTN1-202ENST00000355371 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
SHTN1-202ENST00000355371 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
SHTN1-202ENST00000355371 LCE1CQ5T751 118 aa3.9□□□□□ -1.78
SHTN1-202ENST00000355371 LCE1EQ5T753 118 aa3.9□□□□□ -1.78
SHTN1-202ENST00000355371 LCE1FQ5T754 118 aa3.9□□□□□ -1.78
SHTN1-202ENST00000355371 KMT2DO14686 5537 aa3.84□□□□□ -1.79
SHTN1-202ENST00000355371 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
SHTN1-202ENST00000355371 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
SHTN1-202ENST00000355371 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
SHTN1-202ENST00000355371 NEBP20929 6669 aa3.71□□□□□ -1.82
SHTN1-202ENST00000355371 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
SHTN1-202ENST00000355371 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
SHTN1-202ENST00000355371 KRTAP4-6Q9BYQ5 205 aa3.67□□□□□ -1.82
SHTN1-202ENST00000355371 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
SHTN1-202ENST00000355371 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
SHTN1-202ENST00000355371 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
SHTN1-202ENST00000355371 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
SHTN1-202ENST00000355371 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
SHTN1-202ENST00000355371 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
SHTN1-202ENST00000355371 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
SHTN1-202ENST00000355371 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.89
SHTN1-202ENST00000355371 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
SHTN1-202ENST00000355371 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
SHTN1-202ENST00000355371 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
SHTN1-202ENST00000355371 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
SHTN1-202ENST00000355371 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
SHTN1-202ENST00000355371 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
SHTN1-202ENST00000355371 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
SHTN1-202ENST00000355371 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
SHTN1-202ENST00000355371 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
SHTN1-202ENST00000355371 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
SHTN1-202ENST00000355371 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
SHTN1-202ENST00000355371 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
SHTN1-202ENST00000355371 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
SHTN1-202ENST00000355371 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
SHTN1-202ENST00000355371 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
SHTN1-202ENST00000355371 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
SHTN1-202ENST00000355371 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
SHTN1-202ENST00000355371 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
SHTN1-202ENST00000355371 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms