RNA–Protein interactions for RNA: ENST00000354785.8

FN1-203, Transcript of fibronectin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FN1, Length 8,905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-203ENST00000354785 HERC1Q15751 4861 aa3.37□□□□□ -1.87
FN1-203ENST00000354785 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
FN1-203ENST00000354785 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
FN1-203ENST00000354785 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
FN1-203ENST00000354785 LCE2AQ5TA79 106 aaPredicted RBP3.31□□□□□ -1.88
FN1-203ENST00000354785 MT3P25713 68 aa3.3□□□□□ -1.88
FN1-203ENST00000354785 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
FN1-203ENST00000354785 BIRC6Q9NR09 4857 aa3.24□□□□□ -1.89
FN1-203ENST00000354785 PRM1P04553 51 aa3.24□□□□□ -1.89
FN1-203ENST00000354785 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
FN1-203ENST00000354785 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
FN1-203ENST00000354785 KRTAP2-3P0C7H8 128 aa3.16□□□□□ -1.9
FN1-203ENST00000354785 KRTAP2-4Q9BYR9 128 aa3.16□□□□□ -1.9
FN1-203ENST00000354785 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
FN1-203ENST00000354785 KRTAP4-9Q9BYQ8 210 aa3.14□□□□□ -1.91
FN1-203ENST00000354785 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
FN1-203ENST00000354785 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
FN1-203ENST00000354785 MT1AP04731 61 aa3.11□□□□□ -1.91
FN1-203ENST00000354785 EPPK1P58107 5090 aaKnown RBP3.1□□□□□ -1.91
FN1-203ENST00000354785 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
FN1-203ENST00000354785 UBR4Q5T4S7 5183 aa3.08□□□□□ -1.92
FN1-203ENST00000354785 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
FN1-203ENST00000354785 FAT4Q6V0I7 4981 aa3.03□□□□□ -1.92
FN1-203ENST00000354785 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
FN1-203ENST00000354785 KMT2DO14686 5537 aa3.01□□□□□ -1.93
FN1-203ENST00000354785 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
FN1-203ENST00000354785 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
FN1-203ENST00000354785 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
FN1-203ENST00000354785 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
FN1-203ENST00000354785 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
FN1-203ENST00000354785 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
FN1-203ENST00000354785 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
FN1-203ENST00000354785 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
FN1-203ENST00000354785 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.94
FN1-203ENST00000354785 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
FN1-203ENST00000354785 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
FN1-203ENST00000354785 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
FN1-203ENST00000354785 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
FN1-203ENST00000354785 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
FN1-203ENST00000354785 KRTAP2-2Q9BYT5 123 aa2.79□□□□□ -1.96
FN1-203ENST00000354785 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
FN1-203ENST00000354785 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
FN1-203ENST00000354785 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
FN1-203ENST00000354785 USH2AO75445 5202 aa2.56□□□□□ -2
FN1-203ENST00000354785 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
FN1-203ENST00000354785 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
FN1-203ENST00000354785 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
FN1-203ENST00000354785 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2
FN1-203ENST00000354785 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
FN1-203ENST00000354785 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.03
FN1-203ENST00000354785 SSPOA2VEC9 5147 aa2.37□□□□□ -2.03
FN1-203ENST00000354785 NEBP20929 6669 aa2.35□□□□□ -2.03
FN1-203ENST00000354785 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
FN1-203ENST00000354785 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
FN1-203ENST00000354785 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
FN1-203ENST00000354785 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
FN1-203ENST00000354785 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
FN1-203ENST00000354785 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
FN1-203ENST00000354785 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
FN1-203ENST00000354785 KRTAP5-3Q6L8H2 238 aa1.96□□□□□ -2.1
FN1-203ENST00000354785 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
FN1-203ENST00000354785 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
FN1-203ENST00000354785 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
FN1-203ENST00000354785 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
FN1-203ENST00000354785 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
FN1-203ENST00000354785 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
FN1-203ENST00000354785 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
FN1-203ENST00000354785 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
FN1-203ENST00000354785 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
FN1-203ENST00000354785 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
FN1-203ENST00000354785 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
FN1-203ENST00000354785 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
FN1-203ENST00000354785 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
FN1-203ENST00000354785 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
FN1-203ENST00000354785 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
FN1-203ENST00000354785 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
FN1-203ENST00000354785 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms