RNA–Protein interactions for RNA: ENST00000354452.7

TCF4-201, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-201ENST00000354452 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
TCF4-201ENST00000354452 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
TCF4-201ENST00000354452 MT1GP13640 62 aa5.82□□□□□ -1.48
TCF4-201ENST00000354452 KRTAP4-3Q9BYR4 195 aa5.8□□□□□ -1.48
TCF4-201ENST00000354452 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
TCF4-201ENST00000354452 MT1EP04732 61 aa5.77□□□□□ -1.49
TCF4-201ENST00000354452 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
TCF4-201ENST00000354452 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
TCF4-201ENST00000354452 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
TCF4-201ENST00000354452 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
TCF4-201ENST00000354452 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
TCF4-201ENST00000354452 MT1MQ8N339 61 aa5.41□□□□□ -1.54
TCF4-201ENST00000354452 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
TCF4-201ENST00000354452 SYNE2Q8WXH0 6885 aaKnown RBP5.35□□□□□ -1.55
TCF4-201ENST00000354452 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
TCF4-201ENST00000354452 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
TCF4-201ENST00000354452 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
TCF4-201ENST00000354452 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
TCF4-201ENST00000354452 PRM1P04553 51 aa5.25□□□□□ -1.57
TCF4-201ENST00000354452 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
TCF4-201ENST00000354452 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.57
TCF4-201ENST00000354452 LCE3EQ5T5B0 92 aa5.2□□□□□ -1.58
TCF4-201ENST00000354452 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
TCF4-201ENST00000354452 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
TCF4-201ENST00000354452 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
TCF4-201ENST00000354452 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
TCF4-201ENST00000354452 MT1AP04731 61 aa4.95□□□□□ -1.62
TCF4-201ENST00000354452 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
TCF4-201ENST00000354452 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
TCF4-201ENST00000354452 KRTAP5-5Q701N2 237 aaPredicted RBP4.89□□□□□ -1.63
TCF4-201ENST00000354452 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
TCF4-201ENST00000354452 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
TCF4-201ENST00000354452 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
TCF4-201ENST00000354452 SPRR2EP22531 72 aa4.69□□□□□ -1.66
TCF4-201ENST00000354452 SPRR2BP35325 72 aa4.69□□□□□ -1.66
TCF4-201ENST00000354452 SPRR2AP35326 72 aa4.69□□□□□ -1.66
TCF4-201ENST00000354452 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.67
TCF4-201ENST00000354452 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
TCF4-201ENST00000354452 MUC19Q7Z5P9 8384 aa4.54□□□□□ -1.68
TCF4-201ENST00000354452 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
TCF4-201ENST00000354452 MT3P25713 68 aa4.49□□□□□ -1.69
TCF4-201ENST00000354452 SPRR2DP22532 72 aa4.46□□□□□ -1.7
TCF4-201ENST00000354452 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
TCF4-201ENST00000354452 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
TCF4-201ENST00000354452 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
TCF4-201ENST00000354452 NEBP20929 6669 aa4.15□□□□□ -1.75
TCF4-201ENST00000354452 MT4P47944 62 aa4.15□□□□□ -1.75
TCF4-201ENST00000354452 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
TCF4-201ENST00000354452 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
TCF4-201ENST00000354452 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
TCF4-201ENST00000354452 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
TCF4-201ENST00000354452 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
TCF4-201ENST00000354452 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
TCF4-201ENST00000354452 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
TCF4-201ENST00000354452 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
TCF4-201ENST00000354452 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
TCF4-201ENST00000354452 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
TCF4-201ENST00000354452 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
TCF4-201ENST00000354452 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
TCF4-201ENST00000354452 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
TCF4-201ENST00000354452 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
TCF4-201ENST00000354452 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
TCF4-201ENST00000354452 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
TCF4-201ENST00000354452 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
TCF4-201ENST00000354452 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
TCF4-201ENST00000354452 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
TCF4-201ENST00000354452 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
TCF4-201ENST00000354452 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
TCF4-201ENST00000354452 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
TCF4-201ENST00000354452 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
TCF4-201ENST00000354452 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
TCF4-201ENST00000354452 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
TCF4-201ENST00000354452 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
TCF4-201ENST00000354452 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
TCF4-201ENST00000354452 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
TCF4-201ENST00000354452 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
TCF4-201ENST00000354452 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms