RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
MBD1-205ENST00000353909 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
MBD1-205ENST00000353909 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
MBD1-205ENST00000353909 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
MBD1-205ENST00000353909 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
MBD1-205ENST00000353909 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
MBD1-205ENST00000353909 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
MBD1-205ENST00000353909 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
MBD1-205ENST00000353909 MT1MQ8N339 61 aa5.17□□□□□ -1.58
MBD1-205ENST00000353909 MT1GP13640 62 aa5.14□□□□□ -1.59
MBD1-205ENST00000353909 MDN1Q9NU22 5596 aa5.08□□□□□ -1.6
MBD1-205ENST00000353909 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
MBD1-205ENST00000353909 CRCT1Q9UGL9 99 aa5.07□□□□□ -1.6
MBD1-205ENST00000353909 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
MBD1-205ENST00000353909 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
MBD1-205ENST00000353909 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
MBD1-205ENST00000353909 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
MBD1-205ENST00000353909 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
MBD1-205ENST00000353909 SPRR2EP22531 72 aa4.78□□□□□ -1.65
MBD1-205ENST00000353909 SPRR2BP35325 72 aa4.78□□□□□ -1.65
MBD1-205ENST00000353909 SPRR2AP35326 72 aa4.78□□□□□ -1.65
MBD1-205ENST00000353909 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
MBD1-205ENST00000353909 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
MBD1-205ENST00000353909 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
MBD1-205ENST00000353909 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
MBD1-205ENST00000353909 LCE3BQ5TA77 95 aa4.65□□□□□ -1.66
MBD1-205ENST00000353909 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
MBD1-205ENST00000353909 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.67
MBD1-205ENST00000353909 MT1AP04731 61 aa4.57□□□□□ -1.68
MBD1-205ENST00000353909 SPRR2DP22532 72 aa4.57□□□□□ -1.68
MBD1-205ENST00000353909 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
MBD1-205ENST00000353909 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
MBD1-205ENST00000353909 NEBP20929 6669 aa4.36□□□□□ -1.71
MBD1-205ENST00000353909 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
MBD1-205ENST00000353909 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.72
MBD1-205ENST00000353909 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
MBD1-205ENST00000353909 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
MBD1-205ENST00000353909 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
MBD1-205ENST00000353909 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
MBD1-205ENST00000353909 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
MBD1-205ENST00000353909 MT3P25713 68 aa4.11□□□□□ -1.75
MBD1-205ENST00000353909 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
MBD1-205ENST00000353909 MT4P47944 62 aa4.08□□□□□ -1.76
MBD1-205ENST00000353909 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
MBD1-205ENST00000353909 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
MBD1-205ENST00000353909 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
MBD1-205ENST00000353909 PRM1P04553 51 aa3.89□□□□□ -1.79
MBD1-205ENST00000353909 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
MBD1-205ENST00000353909 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
MBD1-205ENST00000353909 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
MBD1-205ENST00000353909 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
MBD1-205ENST00000353909 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
MBD1-205ENST00000353909 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
MBD1-205ENST00000353909 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
MBD1-205ENST00000353909 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
MBD1-205ENST00000353909 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.88
MBD1-205ENST00000353909 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
MBD1-205ENST00000353909 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
MBD1-205ENST00000353909 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
MBD1-205ENST00000353909 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
MBD1-205ENST00000353909 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
MBD1-205ENST00000353909 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
MBD1-205ENST00000353909 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
MBD1-205ENST00000353909 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
MBD1-205ENST00000353909 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
MBD1-205ENST00000353909 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
MBD1-205ENST00000353909 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
MBD1-205ENST00000353909 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
MBD1-205ENST00000353909 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
MBD1-205ENST00000353909 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
MBD1-205ENST00000353909 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.97
MBD1-205ENST00000353909 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
MBD1-205ENST00000353909 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
MBD1-205ENST00000353909 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
MBD1-205ENST00000353909 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
MBD1-205ENST00000353909 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
MBD1-205ENST00000353909 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms