RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SSPOA2VEC9 5147 aa8.46□□□□□ -1.06
CPNE1-202ENST00000352393 KRTAP19-6Q3LI70 58 aa8.36□□□□□ -1.07
CPNE1-202ENST00000352393 CRCT1Q9UGL9 99 aa8.26□□□□□ -1.09
CPNE1-202ENST00000352393 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
CPNE1-202ENST00000352393 FCGBPQ9Y6R7 5405 aaPredicted RBP8.08□□□□□ -1.12
CPNE1-202ENST00000352393 KRTAP4-3Q9BYR4 195 aa7.96□□□□□ -1.13
CPNE1-202ENST00000352393 LOC100996750A0A140TA64 210 aa7.94□□□□□ -1.14
CPNE1-202ENST00000352393 MT1MQ8N339 61 aa7.89□□□□□ -1.15
CPNE1-202ENST00000352393 MT1GP13640 62 aa7.88□□□□□ -1.15
CPNE1-202ENST00000352393 KRTAP19-3Q7Z4W3 81 aa7.87□□□□□ -1.15
CPNE1-202ENST00000352393 MACF1Q9UPN3 7388 aaKnown RBP7.72□□□□□ -1.17
CPNE1-202ENST00000352393 MUC12Q9UKN1 5478 aa7.71□□□□□ -1.17
CPNE1-202ENST00000352393 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.68□□□□□ -1.18
CPNE1-202ENST00000352393 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.19
CPNE1-202ENST00000352393 LCE5AQ5TCM9 118 aa7.58□□□□□ -1.2
CPNE1-202ENST00000352393 SPRR2FQ96RM1 72 aa7.52□□□□□ -1.2
CPNE1-202ENST00000352393 KRTAP12-4P60329 112 aa7.46□□□□□ -1.22
CPNE1-202ENST00000352393 KRTAP9-7A8MTY7 169 aa7.42□□□□□ -1.22
CPNE1-202ENST00000352393 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
CPNE1-202ENST00000352393 KRTAP6-3Q3LI67 103 aa7.28□□□□□ -1.24
CPNE1-202ENST00000352393 DSTQ03001 7570 aaKnown RBP7.25□□□□□ -1.25
CPNE1-202ENST00000352393 MT1AP04731 61 aa7.19□□□□□ -1.26
CPNE1-202ENST00000352393 KRTAP5-9P26371 169 aa7.19□□□□□ -1.26
CPNE1-202ENST00000352393 KRTAP6-1Q3LI64 71 aa7.18□□□□□ -1.26
CPNE1-202ENST00000352393 KRTAP4-9Q9BYQ8 210 aa7.17□□□□□ -1.26
CPNE1-202ENST00000352393 MDN1Q9NU22 5596 aa7.13□□□□□ -1.27
CPNE1-202ENST00000352393 LCE1AQ5T7P2 110 aa7.1□□□□□ -1.27
CPNE1-202ENST00000352393 KRTAP5-5Q701N2 237 aaPredicted RBP7□□□□□ -1.29
CPNE1-202ENST00000352393 LCE3DQ9BYE3 92 aa6.95□□□□□ -1.3
CPNE1-202ENST00000352393 SPRR2EP22531 72 aa6.94□□□□□ -1.3
CPNE1-202ENST00000352393 SPRR2BP35325 72 aa6.94□□□□□ -1.3
CPNE1-202ENST00000352393 SPRR2AP35326 72 aa6.94□□□□□ -1.3
CPNE1-202ENST00000352393 NEBP20929 6669 aa6.94□□□□□ -1.3
CPNE1-202ENST00000352393 SYNE1Q8NF91 8797 aaKnown RBP6.92□□□□□ -1.3
CPNE1-202ENST00000352393 LCE3EQ5T5B0 92 aa6.88□□□□□ -1.31
CPNE1-202ENST00000352393 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
CPNE1-202ENST00000352393 SPRR2DP22532 72 aa6.67□□□□□ -1.34
CPNE1-202ENST00000352393 PRM1P04553 51 aa6.63□□□□□ -1.35
CPNE1-202ENST00000352393 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
CPNE1-202ENST00000352393 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
CPNE1-202ENST00000352393 MT3P25713 68 aa6.36□□□□□ -1.39
CPNE1-202ENST00000352393 KRTAP2-2Q9BYT5 123 aa6.29□□□□□ -1.4
CPNE1-202ENST00000352393 KRTAP5-4Q6L8H1 288 aa6.17□□□□□ -1.42
CPNE1-202ENST00000352393 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
CPNE1-202ENST00000352393 LCE4AQ5TA78 99 aa5.86□□□□□ -1.47
CPNE1-202ENST00000352393 MT4P47944 62 aa5.85□□□□□ -1.47
CPNE1-202ENST00000352393 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
CPNE1-202ENST00000352393 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
CPNE1-202ENST00000352393 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
CPNE1-202ENST00000352393 KRTAP20-2Q3LI61 65 aa5.76□□□□□ -1.49
CPNE1-202ENST00000352393 KRTAP5-2Q701N4 177 aa5.72□□□□□ -1.49
CPNE1-202ENST00000352393 KRTAP5-3Q6L8H2 238 aa5.51□□□□□ -1.53
CPNE1-202ENST00000352393 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
CPNE1-202ENST00000352393 AHNAK2Q8IVF2 5795 aa5.34□□□□□ -1.56
CPNE1-202ENST00000352393 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
CPNE1-202ENST00000352393 GPR98Q8WXG9 6306 aa5.14□□□□□ -1.59
CPNE1-202ENST00000352393 KRTAP5-10Q6L8G5 202 aa5.11□□□□□ -1.59
CPNE1-202ENST00000352393 LCE1BQ5T7P3 118 aa5.06□□□□□ -1.6
CPNE1-202ENST00000352393 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
CPNE1-202ENST00000352393 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
CPNE1-202ENST00000352393 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
CPNE1-202ENST00000352393 LCE1CQ5T751 118 aa4.9□□□□□ -1.62
CPNE1-202ENST00000352393 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
CPNE1-202ENST00000352393 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
CPNE1-202ENST00000352393 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
CPNE1-202ENST00000352393 KRTAP21-2Q3LI59 83 aa4.65□□□□□ -1.67
CPNE1-202ENST00000352393 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
CPNE1-202ENST00000352393 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
CPNE1-202ENST00000352393 KRTAP21-1Q3LI58 79 aa4.22□□□□□ -1.73
CPNE1-202ENST00000352393 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
CPNE1-202ENST00000352393 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
CPNE1-202ENST00000352393 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
CPNE1-202ENST00000352393 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
CPNE1-202ENST00000352393 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
CPNE1-202ENST00000352393 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
CPNE1-202ENST00000352393 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
CPNE1-202ENST00000352393 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms