RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 MACF1Q9UPN3 7388 aaKnown RBP8.14□□□□□ -1.11
USP25-203ENST00000351097 CRCT1Q9UGL9 99 aa8.11□□□□□ -1.11
USP25-203ENST00000351097 MUC12Q9UKN1 5478 aa8.08□□□□□ -1.12
USP25-203ENST00000351097 KRTAP2-3P0C7H8 128 aa8□□□□□ -1.13
USP25-203ENST00000351097 KRTAP2-4Q9BYR9 128 aa8□□□□□ -1.13
USP25-203ENST00000351097 KRTAP2-1Q9BYU5 128 aa8□□□□□ -1.13
USP25-203ENST00000351097 SPRR2FQ96RM1 72 aa7.97□□□□□ -1.13
USP25-203ENST00000351097 KRTAP19-3Q7Z4W3 81 aa7.96□□□□□ -1.14
USP25-203ENST00000351097 SYNE2Q8WXH0 6885 aaKnown RBP7.91□□□□□ -1.14
USP25-203ENST00000351097 MT1GP13640 62 aa7.9□□□□□ -1.15
USP25-203ENST00000351097 MT1MQ8N339 61 aa7.86□□□□□ -1.15
USP25-203ENST00000351097 KRTAP4-3Q9BYR4 195 aa7.81□□□□□ -1.16
USP25-203ENST00000351097 LCE5AQ5TCM9 118 aa7.8□□□□□ -1.16
USP25-203ENST00000351097 KRTAP5-9P26371 169 aa7.73□□□□□ -1.17
USP25-203ENST00000351097 MDN1Q9NU22 5596 aa7.67□□□□□ -1.18
USP25-203ENST00000351097 KRTAP9-6A0A140TA67 174 aa7.63□□□□□ -1.19
USP25-203ENST00000351097 LOC100996750A0A140TA64 210 aa7.63□□□□□ -1.19
USP25-203ENST00000351097 LCE1AQ5T7P2 110 aa7.57□□□□□ -1.2
USP25-203ENST00000351097 DSTQ03001 7570 aaKnown RBP7.53□□□□□ -1.2
USP25-203ENST00000351097 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
USP25-203ENST00000351097 SPRR2EP22531 72 aa7.44□□□□□ -1.22
USP25-203ENST00000351097 SPRR2BP35325 72 aa7.44□□□□□ -1.22
USP25-203ENST00000351097 SPRR2AP35326 72 aa7.44□□□□□ -1.22
USP25-203ENST00000351097 KRTAP6-3Q3LI67 103 aa7.4□□□□□ -1.23
USP25-203ENST00000351097 SPRR2DP22532 72 aa7.15□□□□□ -1.26
USP25-203ENST00000351097 KRTAP5-5Q701N2 237 aaPredicted RBP7.06□□□□□ -1.28
USP25-203ENST00000351097 KRTAP12-4P60329 112 aa7.03□□□□□ -1.28
USP25-203ENST00000351097 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
USP25-203ENST00000351097 LCE3BQ5TA77 95 aa7□□□□□ -1.29
USP25-203ENST00000351097 MT1AP04731 61 aa6.98□□□□□ -1.29
USP25-203ENST00000351097 KRTAP6-1Q3LI64 71 aa6.98□□□□□ -1.29
USP25-203ENST00000351097 NEBP20929 6669 aa6.95□□□□□ -1.3
USP25-203ENST00000351097 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
USP25-203ENST00000351097 SYNE1Q8NF91 8797 aaKnown RBP6.79□□□□□ -1.32
USP25-203ENST00000351097 LCE3DQ9BYE3 92 aa6.63□□□□□ -1.35
USP25-203ENST00000351097 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
USP25-203ENST00000351097 KRTAP5-4Q6L8H1 288 aa6.55□□□□□ -1.36
USP25-203ENST00000351097 LCE3EQ5T5B0 92 aa6.54□□□□□ -1.36
USP25-203ENST00000351097 KRTAP6-2Q3LI66 62 aa6.37□□□□□ -1.39
USP25-203ENST00000351097 MT3P25713 68 aa6.3□□□□□ -1.4
USP25-203ENST00000351097 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
USP25-203ENST00000351097 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
USP25-203ENST00000351097 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
USP25-203ENST00000351097 MT4P47944 62 aa6.25□□□□□ -1.41
USP25-203ENST00000351097 PRM1P04553 51 aa6.21□□□□□ -1.42
USP25-203ENST00000351097 KRTAP20-1Q3LI63 56 aa6.19□□□□□ -1.42
USP25-203ENST00000351097 KRTAP20-2Q3LI61 65 aa6.13□□□□□ -1.43
USP25-203ENST00000351097 HMCN1Q96RW7 5635 aa6.08□□□□□ -1.44
USP25-203ENST00000351097 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
USP25-203ENST00000351097 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
USP25-203ENST00000351097 OBSCNQ5VST9 7968 aa6□□□□□ -1.45
USP25-203ENST00000351097 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
USP25-203ENST00000351097 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
USP25-203ENST00000351097 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
USP25-203ENST00000351097 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
USP25-203ENST00000351097 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
USP25-203ENST00000351097 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.58
USP25-203ENST00000351097 LCE1BQ5T7P3 118 aa5.12□□□□□ -1.59
USP25-203ENST00000351097 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
USP25-203ENST00000351097 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
USP25-203ENST00000351097 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
USP25-203ENST00000351097 LCE1CQ5T751 118 aa5.03□□□□□ -1.6
USP25-203ENST00000351097 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
USP25-203ENST00000351097 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
USP25-203ENST00000351097 GPR98Q8WXG9 6306 aa4.57□□□□□ -1.68
USP25-203ENST00000351097 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
USP25-203ENST00000351097 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.7
USP25-203ENST00000351097 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
USP25-203ENST00000351097 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
USP25-203ENST00000351097 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
USP25-203ENST00000351097 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
USP25-203ENST00000351097 KRTAP21-1Q3LI58 79 aa3.92□□□□□ -1.78
USP25-203ENST00000351097 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
USP25-203ENST00000351097 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
USP25-203ENST00000351097 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
USP25-203ENST00000351097 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
USP25-203ENST00000351097 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms