RNA–Protein interactions for RNA: ENST00000349953.7

PARD3B-201, Transcript of par-3 family cell polarity regulator beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARD3B, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-201ENST00000349953 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
PARD3B-201ENST00000349953 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
PARD3B-201ENST00000349953 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
PARD3B-201ENST00000349953 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
PARD3B-201ENST00000349953 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
PARD3B-201ENST00000349953 MT1GP13640 62 aa3.88□□□□□ -1.79
PARD3B-201ENST00000349953 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
PARD3B-201ENST00000349953 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
PARD3B-201ENST00000349953 MT1MQ8N339 61 aa3.82□□□□□ -1.8
PARD3B-201ENST00000349953 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
PARD3B-201ENST00000349953 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
PARD3B-201ENST00000349953 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
PARD3B-201ENST00000349953 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
PARD3B-201ENST00000349953 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
PARD3B-201ENST00000349953 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
PARD3B-201ENST00000349953 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
PARD3B-201ENST00000349953 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
PARD3B-201ENST00000349953 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
PARD3B-201ENST00000349953 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
PARD3B-201ENST00000349953 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
PARD3B-201ENST00000349953 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
PARD3B-201ENST00000349953 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
PARD3B-201ENST00000349953 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
PARD3B-201ENST00000349953 SPRR2EP22531 72 aa3.5□□□□□ -1.85
PARD3B-201ENST00000349953 SPRR2BP35325 72 aa3.5□□□□□ -1.85
PARD3B-201ENST00000349953 SPRR2AP35326 72 aa3.5□□□□□ -1.85
PARD3B-201ENST00000349953 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
PARD3B-201ENST00000349953 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
PARD3B-201ENST00000349953 MT1AP04731 61 aa3.35□□□□□ -1.87
PARD3B-201ENST00000349953 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
PARD3B-201ENST00000349953 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
PARD3B-201ENST00000349953 SPRR2DP22532 72 aa3.33□□□□□ -1.88
PARD3B-201ENST00000349953 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
PARD3B-201ENST00000349953 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
PARD3B-201ENST00000349953 PRM1P04553 51 aa3.21□□□□□ -1.9
PARD3B-201ENST00000349953 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
PARD3B-201ENST00000349953 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
PARD3B-201ENST00000349953 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
PARD3B-201ENST00000349953 NEBP20929 6669 aa3.14□□□□□ -1.91
PARD3B-201ENST00000349953 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
PARD3B-201ENST00000349953 MT4P47944 62 aa3.05□□□□□ -1.92
PARD3B-201ENST00000349953 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
PARD3B-201ENST00000349953 MT3P25713 68 aa3□□□□□ -1.93
PARD3B-201ENST00000349953 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
PARD3B-201ENST00000349953 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
PARD3B-201ENST00000349953 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
PARD3B-201ENST00000349953 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
PARD3B-201ENST00000349953 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
PARD3B-201ENST00000349953 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
PARD3B-201ENST00000349953 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
PARD3B-201ENST00000349953 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
PARD3B-201ENST00000349953 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
PARD3B-201ENST00000349953 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
PARD3B-201ENST00000349953 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
PARD3B-201ENST00000349953 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
PARD3B-201ENST00000349953 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
PARD3B-201ENST00000349953 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
PARD3B-201ENST00000349953 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
PARD3B-201ENST00000349953 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
PARD3B-201ENST00000349953 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
PARD3B-201ENST00000349953 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
PARD3B-201ENST00000349953 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
PARD3B-201ENST00000349953 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
PARD3B-201ENST00000349953 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
PARD3B-201ENST00000349953 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.05
PARD3B-201ENST00000349953 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
PARD3B-201ENST00000349953 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
PARD3B-201ENST00000349953 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
PARD3B-201ENST00000349953 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
PARD3B-201ENST00000349953 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
PARD3B-201ENST00000349953 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
PARD3B-201ENST00000349953 KRTAP9-9Q9BYP9 154 aa2.01□□□□□ -2.09
PARD3B-201ENST00000349953 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
PARD3B-201ENST00000349953 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
PARD3B-201ENST00000349953 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
PARD3B-201ENST00000349953 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
PARD3B-201ENST00000349953 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms