RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
UBA3-201ENST00000349511 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
UBA3-201ENST00000349511 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
UBA3-201ENST00000349511 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
UBA3-201ENST00000349511 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
UBA3-201ENST00000349511 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
UBA3-201ENST00000349511 MUC12Q9UKN1 5478 aa4.89□□□□□ -1.63
UBA3-201ENST00000349511 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
UBA3-201ENST00000349511 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
UBA3-201ENST00000349511 MT1EP04732 61 aa4.81□□□□□ -1.64
UBA3-201ENST00000349511 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
UBA3-201ENST00000349511 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
UBA3-201ENST00000349511 INE1O15225 51 aa4.78□□□□□ -1.64
UBA3-201ENST00000349511 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
UBA3-201ENST00000349511 MT1LQ93083 61 aa4.73□□□□□ -1.65
UBA3-201ENST00000349511 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
UBA3-201ENST00000349511 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
UBA3-201ENST00000349511 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
UBA3-201ENST00000349511 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
UBA3-201ENST00000349511 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
UBA3-201ENST00000349511 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
UBA3-201ENST00000349511 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
UBA3-201ENST00000349511 MT1GP13640 62 aa4.55□□□□□ -1.68
UBA3-201ENST00000349511 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
UBA3-201ENST00000349511 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
UBA3-201ENST00000349511 MT1MQ8N339 61 aa4.54□□□□□ -1.68
UBA3-201ENST00000349511 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
UBA3-201ENST00000349511 SPRR2EP22531 72 aa4.51□□□□□ -1.69
UBA3-201ENST00000349511 SPRR2BP35325 72 aa4.51□□□□□ -1.69
UBA3-201ENST00000349511 SPRR2AP35326 72 aa4.51□□□□□ -1.69
UBA3-201ENST00000349511 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
UBA3-201ENST00000349511 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
UBA3-201ENST00000349511 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
UBA3-201ENST00000349511 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
UBA3-201ENST00000349511 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
UBA3-201ENST00000349511 SPRR2DP22532 72 aa4.33□□□□□ -1.72
UBA3-201ENST00000349511 NEBP20929 6669 aa4.29□□□□□ -1.72
UBA3-201ENST00000349511 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
UBA3-201ENST00000349511 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
UBA3-201ENST00000349511 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
UBA3-201ENST00000349511 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
UBA3-201ENST00000349511 MT1AP04731 61 aa3.97□□□□□ -1.77
UBA3-201ENST00000349511 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
UBA3-201ENST00000349511 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
UBA3-201ENST00000349511 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
UBA3-201ENST00000349511 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
UBA3-201ENST00000349511 MT4P47944 62 aa3.83□□□□□ -1.8
UBA3-201ENST00000349511 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
UBA3-201ENST00000349511 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
UBA3-201ENST00000349511 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
UBA3-201ENST00000349511 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
UBA3-201ENST00000349511 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.82
UBA3-201ENST00000349511 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
UBA3-201ENST00000349511 MT3P25713 68 aa3.61□□□□□ -1.83
UBA3-201ENST00000349511 PRM1P04553 51 aa3.52□□□□□ -1.85
UBA3-201ENST00000349511 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
UBA3-201ENST00000349511 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
UBA3-201ENST00000349511 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
UBA3-201ENST00000349511 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
UBA3-201ENST00000349511 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
UBA3-201ENST00000349511 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
UBA3-201ENST00000349511 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
UBA3-201ENST00000349511 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
UBA3-201ENST00000349511 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
UBA3-201ENST00000349511 MUC5ACP98088 5654 aa3□□□□□ -1.93
UBA3-201ENST00000349511 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
UBA3-201ENST00000349511 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
UBA3-201ENST00000349511 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
UBA3-201ENST00000349511 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
UBA3-201ENST00000349511 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
UBA3-201ENST00000349511 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
UBA3-201ENST00000349511 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
UBA3-201ENST00000349511 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
UBA3-201ENST00000349511 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
UBA3-201ENST00000349511 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
UBA3-201ENST00000349511 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
UBA3-201ENST00000349511 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 185.2 ms