RNA–Protein interactions for RNA: ENST00000348386.7

CAST-205, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-205ENST00000348386 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
CAST-205ENST00000348386 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
CAST-205ENST00000348386 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
CAST-205ENST00000348386 MT1XP80297 61 aa3.21□□□□□ -1.9
CAST-205ENST00000348386 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
CAST-205ENST00000348386 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
CAST-205ENST00000348386 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
CAST-205ENST00000348386 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
CAST-205ENST00000348386 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
CAST-205ENST00000348386 KMT2DO14686 5537 aa3.06□□□□□ -1.92
CAST-205ENST00000348386 TNP1P09430 55 aa3.04□□□□□ -1.92
CAST-205ENST00000348386 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
CAST-205ENST00000348386 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
CAST-205ENST00000348386 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
CAST-205ENST00000348386 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
CAST-205ENST00000348386 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
CAST-205ENST00000348386 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.93
CAST-205ENST00000348386 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
CAST-205ENST00000348386 INE1O15225 51 aa2.95□□□□□ -1.94
CAST-205ENST00000348386 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
CAST-205ENST00000348386 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
CAST-205ENST00000348386 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
CAST-205ENST00000348386 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
CAST-205ENST00000348386 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
CAST-205ENST00000348386 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
CAST-205ENST00000348386 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
CAST-205ENST00000348386 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
CAST-205ENST00000348386 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
CAST-205ENST00000348386 MT1EP04732 61 aa2.82□□□□□ -1.96
CAST-205ENST00000348386 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
CAST-205ENST00000348386 SPRR2EP22531 72 aa2.79□□□□□ -1.96
CAST-205ENST00000348386 SPRR2BP35325 72 aa2.79□□□□□ -1.96
CAST-205ENST00000348386 SPRR2AP35326 72 aa2.79□□□□□ -1.96
CAST-205ENST00000348386 MT1LQ93083 61 aa2.74□□□□□ -1.97
CAST-205ENST00000348386 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
CAST-205ENST00000348386 NEBP20929 6669 aa2.71□□□□□ -1.97
CAST-205ENST00000348386 MT1GP13640 62 aa2.69□□□□□ -1.98
CAST-205ENST00000348386 SPRR2DP22532 72 aa2.68□□□□□ -1.98
CAST-205ENST00000348386 MT1MQ8N339 61 aa2.66□□□□□ -1.98
CAST-205ENST00000348386 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
CAST-205ENST00000348386 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
CAST-205ENST00000348386 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
CAST-205ENST00000348386 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
CAST-205ENST00000348386 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
CAST-205ENST00000348386 KRTAP2-1Q9BYU5 128 aa2.5□□□□□ -2.01
CAST-205ENST00000348386 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
CAST-205ENST00000348386 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
CAST-205ENST00000348386 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
CAST-205ENST00000348386 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
CAST-205ENST00000348386 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
CAST-205ENST00000348386 MT4P47944 62 aa2.36□□□□□ -2.03
CAST-205ENST00000348386 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
CAST-205ENST00000348386 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
CAST-205ENST00000348386 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
CAST-205ENST00000348386 MT1AP04731 61 aa2.32□□□□□ -2.04
CAST-205ENST00000348386 SYNE1Q8NF91 8797 aaKnown RBP2.31□□□□□ -2.04
CAST-205ENST00000348386 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
CAST-205ENST00000348386 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
CAST-205ENST00000348386 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
CAST-205ENST00000348386 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
CAST-205ENST00000348386 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
CAST-205ENST00000348386 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
CAST-205ENST00000348386 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
CAST-205ENST00000348386 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
CAST-205ENST00000348386 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
CAST-205ENST00000348386 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
CAST-205ENST00000348386 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
CAST-205ENST00000348386 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
CAST-205ENST00000348386 PRM1P04553 51 aa1.87□□□□□ -2.11
CAST-205ENST00000348386 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
CAST-205ENST00000348386 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
CAST-205ENST00000348386 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CAST-205ENST00000348386 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
CAST-205ENST00000348386 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
CAST-205ENST00000348386 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
CAST-205ENST00000348386 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
CAST-205ENST00000348386 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
CAST-205ENST00000348386 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 107.5 ms