RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
VCAM1-202ENST00000347652 M0QZ58 72 aa2.22□□□□□ -2.05
VCAM1-202ENST00000347652 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
VCAM1-202ENST00000347652 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.06
VCAM1-202ENST00000347652 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
VCAM1-202ENST00000347652 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
VCAM1-202ENST00000347652 MT1BP07438 61 aa2.19□□□□□ -2.06
VCAM1-202ENST00000347652 MT3P25713 68 aa2.19□□□□□ -2.06
VCAM1-202ENST00000347652 C10orf95Q9H7T3 257 aa2.18□□□□□ -2.06
VCAM1-202ENST00000347652 KRTAP19-6Q3LI70 58 aa2.18□□□□□ -2.06
VCAM1-202ENST00000347652 KRTAP10-12P60413 245 aa2.17□□□□□ -2.06
VCAM1-202ENST00000347652 MACF1Q9UPN3 7388 aaKnown RBP2.15□□□□□ -2.06
VCAM1-202ENST00000347652 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
VCAM1-202ENST00000347652 A0A0D9SG42 100 aa2.14□□□□□ -2.07
VCAM1-202ENST00000347652 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
VCAM1-202ENST00000347652 KRTAP10-5P60370 271 aa2.1□□□□□ -2.07
VCAM1-202ENST00000347652 MT1XP80297 61 aa2.09□□□□□ -2.07
VCAM1-202ENST00000347652 KMT2DO14686 5537 aa2.08□□□□□ -2.08
VCAM1-202ENST00000347652 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
VCAM1-202ENST00000347652 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
VCAM1-202ENST00000347652 MUC12Q9UKN1 5478 aa2.03□□□□□ -2.08
VCAM1-202ENST00000347652 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.09
VCAM1-202ENST00000347652 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
VCAM1-202ENST00000347652 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
VCAM1-202ENST00000347652 TNP1P09430 55 aa1.96□□□□□ -2.1
VCAM1-202ENST00000347652 KRTAP5-9P26371 169 aa1.96□□□□□ -2.1
VCAM1-202ENST00000347652 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
VCAM1-202ENST00000347652 NEBP20929 6669 aa1.94□□□□□ -2.1
VCAM1-202ENST00000347652 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
VCAM1-202ENST00000347652 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
VCAM1-202ENST00000347652 LCE3AQ5TA76 89 aa1.9□□□□□ -2.1
VCAM1-202ENST00000347652 SPRR2EP22531 72 aa1.89□□□□□ -2.11
VCAM1-202ENST00000347652 SPRR2BP35325 72 aa1.89□□□□□ -2.11
VCAM1-202ENST00000347652 SPRR2AP35326 72 aa1.89□□□□□ -2.11
VCAM1-202ENST00000347652 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
VCAM1-202ENST00000347652 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
VCAM1-202ENST00000347652 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
VCAM1-202ENST00000347652 MT1EP04732 61 aa1.84□□□□□ -2.11
VCAM1-202ENST00000347652 KRTAP20-1Q3LI63 56 aa1.84□□□□□ -2.12
VCAM1-202ENST00000347652 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
VCAM1-202ENST00000347652 SPRR2DP22532 72 aa1.81□□□□□ -2.12
VCAM1-202ENST00000347652 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
VCAM1-202ENST00000347652 KRTAP2-3P0C7H8 128 aa1.8□□□□□ -2.12
VCAM1-202ENST00000347652 KRTAP2-4Q9BYR9 128 aa1.8□□□□□ -2.12
VCAM1-202ENST00000347652 KRTAP5-4Q6L8H1 288 aa1.79□□□□□ -2.12
VCAM1-202ENST00000347652 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
VCAM1-202ENST00000347652 MT1LQ93083 61 aa1.79□□□□□ -2.12
VCAM1-202ENST00000347652 MT1GP13640 62 aa1.76□□□□□ -2.13
VCAM1-202ENST00000347652 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
VCAM1-202ENST00000347652 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
VCAM1-202ENST00000347652 MT1MQ8N339 61 aa1.74□□□□□ -2.13
VCAM1-202ENST00000347652 KRTAP4-3Q9BYR4 195 aa1.73□□□□□ -2.13
VCAM1-202ENST00000347652 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
VCAM1-202ENST00000347652 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
VCAM1-202ENST00000347652 MT4P47944 62 aa1.62□□□□□ -2.15
VCAM1-202ENST00000347652 KRTAP9-6A8MVA2 160 aa1.61□□□□□ -2.15
VCAM1-202ENST00000347652 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.16
VCAM1-202ENST00000347652 KRTAP5-5Q701N2 237 aaPredicted RBP1.59□□□□□ -2.16
VCAM1-202ENST00000347652 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
VCAM1-202ENST00000347652 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
VCAM1-202ENST00000347652 MT1AP04731 61 aa1.52□□□□□ -2.17
VCAM1-202ENST00000347652 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
VCAM1-202ENST00000347652 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
VCAM1-202ENST00000347652 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
VCAM1-202ENST00000347652 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
VCAM1-202ENST00000347652 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
VCAM1-202ENST00000347652 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
VCAM1-202ENST00000347652 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
VCAM1-202ENST00000347652 OBSCNQ5VST9 7968 aa1.41□□□□□ -2.18
VCAM1-202ENST00000347652 KRTAP6-2Q3LI66 62 aa1.41□□□□□ -2.18
VCAM1-202ENST00000347652 KRTAP5-7Q6L8G8 165 aa1.37□□□□□ -2.19
VCAM1-202ENST00000347652 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
VCAM1-202ENST00000347652 PRM1P04553 51 aa1.27□□□□□ -2.21
VCAM1-202ENST00000347652 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
VCAM1-202ENST00000347652 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
VCAM1-202ENST00000347652 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
VCAM1-202ENST00000347652 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 221.3 ms