RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
SRPK1-201ENST00000346162 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
SRPK1-201ENST00000346162 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
SRPK1-201ENST00000346162 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
SRPK1-201ENST00000346162 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
SRPK1-201ENST00000346162 SPRR2DP22532 72 aa4.92□□□□□ -1.62
SRPK1-201ENST00000346162 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
SRPK1-201ENST00000346162 PRM1P04553 51 aa4.87□□□□□ -1.63
SRPK1-201ENST00000346162 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
SRPK1-201ENST00000346162 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
SRPK1-201ENST00000346162 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
SRPK1-201ENST00000346162 MT1MQ8N339 61 aa4.86□□□□□ -1.63
SRPK1-201ENST00000346162 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
SRPK1-201ENST00000346162 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
SRPK1-201ENST00000346162 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
SRPK1-201ENST00000346162 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
SRPK1-201ENST00000346162 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.67
SRPK1-201ENST00000346162 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
SRPK1-201ENST00000346162 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
SRPK1-201ENST00000346162 MT3P25713 68 aa4.52□□□□□ -1.69
SRPK1-201ENST00000346162 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
SRPK1-201ENST00000346162 USH2AO75445 5202 aa4.49□□□□□ -1.69
SRPK1-201ENST00000346162 MT1AP04731 61 aa4.48□□□□□ -1.69
SRPK1-201ENST00000346162 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
SRPK1-201ENST00000346162 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
SRPK1-201ENST00000346162 MT4P47944 62 aa4.42□□□□□ -1.7
SRPK1-201ENST00000346162 KMT2DO14686 5537 aa4.39□□□□□ -1.71
SRPK1-201ENST00000346162 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
SRPK1-201ENST00000346162 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
SRPK1-201ENST00000346162 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
SRPK1-201ENST00000346162 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
SRPK1-201ENST00000346162 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
SRPK1-201ENST00000346162 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
SRPK1-201ENST00000346162 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
SRPK1-201ENST00000346162 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
SRPK1-201ENST00000346162 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
SRPK1-201ENST00000346162 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
SRPK1-201ENST00000346162 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
SRPK1-201ENST00000346162 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
SRPK1-201ENST00000346162 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
SRPK1-201ENST00000346162 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
SRPK1-201ENST00000346162 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
SRPK1-201ENST00000346162 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
SRPK1-201ENST00000346162 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
SRPK1-201ENST00000346162 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
SRPK1-201ENST00000346162 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
SRPK1-201ENST00000346162 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
SRPK1-201ENST00000346162 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
SRPK1-201ENST00000346162 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
SRPK1-201ENST00000346162 NEBP20929 6669 aa3.62□□□□□ -1.83
SRPK1-201ENST00000346162 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
SRPK1-201ENST00000346162 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
SRPK1-201ENST00000346162 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
SRPK1-201ENST00000346162 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SRPK1-201ENST00000346162 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
SRPK1-201ENST00000346162 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
SRPK1-201ENST00000346162 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
SRPK1-201ENST00000346162 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
SRPK1-201ENST00000346162 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
SRPK1-201ENST00000346162 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
SRPK1-201ENST00000346162 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
SRPK1-201ENST00000346162 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
SRPK1-201ENST00000346162 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
SRPK1-201ENST00000346162 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
SRPK1-201ENST00000346162 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
SRPK1-201ENST00000346162 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
SRPK1-201ENST00000346162 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
SRPK1-201ENST00000346162 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
SRPK1-201ENST00000346162 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
SRPK1-201ENST00000346162 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
SRPK1-201ENST00000346162 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SRPK1-201ENST00000346162 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
SRPK1-201ENST00000346162 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
SRPK1-201ENST00000346162 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
SRPK1-201ENST00000346162 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
SRPK1-201ENST00000346162 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
SRPK1-201ENST00000346162 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
SRPK1-201ENST00000346162 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 33.4 ms