RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
CSNK1G3-201ENST00000345990 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.68
CSNK1G3-201ENST00000345990 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
CSNK1G3-201ENST00000345990 MT1MQ8N339 61 aa4.55□□□□□ -1.68
CSNK1G3-201ENST00000345990 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
CSNK1G3-201ENST00000345990 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
CSNK1G3-201ENST00000345990 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
CSNK1G3-201ENST00000345990 USH2AO75445 5202 aa4.44□□□□□ -1.7
CSNK1G3-201ENST00000345990 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
CSNK1G3-201ENST00000345990 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
CSNK1G3-201ENST00000345990 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
CSNK1G3-201ENST00000345990 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
CSNK1G3-201ENST00000345990 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
CSNK1G3-201ENST00000345990 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
CSNK1G3-201ENST00000345990 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
CSNK1G3-201ENST00000345990 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
CSNK1G3-201ENST00000345990 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
CSNK1G3-201ENST00000345990 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
CSNK1G3-201ENST00000345990 MT1AP04731 61 aa4.2□□□□□ -1.74
CSNK1G3-201ENST00000345990 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
CSNK1G3-201ENST00000345990 MT3P25713 68 aa4.14□□□□□ -1.75
CSNK1G3-201ENST00000345990 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
CSNK1G3-201ENST00000345990 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
CSNK1G3-201ENST00000345990 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
CSNK1G3-201ENST00000345990 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.76
CSNK1G3-201ENST00000345990 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
CSNK1G3-201ENST00000345990 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
CSNK1G3-201ENST00000345990 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
CSNK1G3-201ENST00000345990 MT4P47944 62 aa4.02□□□□□ -1.77
CSNK1G3-201ENST00000345990 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
CSNK1G3-201ENST00000345990 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
CSNK1G3-201ENST00000345990 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
CSNK1G3-201ENST00000345990 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
CSNK1G3-201ENST00000345990 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
CSNK1G3-201ENST00000345990 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
CSNK1G3-201ENST00000345990 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
CSNK1G3-201ENST00000345990 NEBP20929 6669 aa3.82□□□□□ -1.8
CSNK1G3-201ENST00000345990 KMT2DO14686 5537 aa3.79□□□□□ -1.8
CSNK1G3-201ENST00000345990 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
CSNK1G3-201ENST00000345990 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
CSNK1G3-201ENST00000345990 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
CSNK1G3-201ENST00000345990 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
CSNK1G3-201ENST00000345990 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
CSNK1G3-201ENST00000345990 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
CSNK1G3-201ENST00000345990 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
CSNK1G3-201ENST00000345990 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
CSNK1G3-201ENST00000345990 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
CSNK1G3-201ENST00000345990 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
CSNK1G3-201ENST00000345990 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
CSNK1G3-201ENST00000345990 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
CSNK1G3-201ENST00000345990 PRM1P04553 51 aa3.44□□□□□ -1.86
CSNK1G3-201ENST00000345990 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
CSNK1G3-201ENST00000345990 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
CSNK1G3-201ENST00000345990 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
CSNK1G3-201ENST00000345990 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
CSNK1G3-201ENST00000345990 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
CSNK1G3-201ENST00000345990 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
CSNK1G3-201ENST00000345990 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
CSNK1G3-201ENST00000345990 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
CSNK1G3-201ENST00000345990 LCE1FQ5T754 118 aa2.84□□□□□ -1.96
CSNK1G3-201ENST00000345990 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
CSNK1G3-201ENST00000345990 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
CSNK1G3-201ENST00000345990 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
CSNK1G3-201ENST00000345990 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
CSNK1G3-201ENST00000345990 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
CSNK1G3-201ENST00000345990 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
CSNK1G3-201ENST00000345990 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
CSNK1G3-201ENST00000345990 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
CSNK1G3-201ENST00000345990 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
CSNK1G3-201ENST00000345990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
CSNK1G3-201ENST00000345990 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
CSNK1G3-201ENST00000345990 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
CSNK1G3-201ENST00000345990 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
CSNK1G3-201ENST00000345990 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
CSNK1G3-201ENST00000345990 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
CSNK1G3-201ENST00000345990 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
CSNK1G3-201ENST00000345990 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 176.6 ms