RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
VHL-202ENST00000345392 KRTAP9-6A0A140TA67 174 aa6.08□□□□□ -1.44
VHL-202ENST00000345392 MT1LQ93083 61 aa6.02□□□□□ -1.44
VHL-202ENST00000345392 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
VHL-202ENST00000345392 MT1EP04732 61 aa5.98□□□□□ -1.45
VHL-202ENST00000345392 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
VHL-202ENST00000345392 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
VHL-202ENST00000345392 LOC100996750A0A140TA64 210 aa5.86□□□□□ -1.47
VHL-202ENST00000345392 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
VHL-202ENST00000345392 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
VHL-202ENST00000345392 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
VHL-202ENST00000345392 MT1GP13640 62 aa5.74□□□□□ -1.49
VHL-202ENST00000345392 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
VHL-202ENST00000345392 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.51
VHL-202ENST00000345392 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
VHL-202ENST00000345392 MT1MQ8N339 61 aa5.59□□□□□ -1.51
VHL-202ENST00000345392 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
VHL-202ENST00000345392 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
VHL-202ENST00000345392 MDN1Q9NU22 5596 aa5.55□□□□□ -1.52
VHL-202ENST00000345392 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
VHL-202ENST00000345392 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
VHL-202ENST00000345392 LCE3BQ5TA77 95 aa5.4□□□□□ -1.55
VHL-202ENST00000345392 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
VHL-202ENST00000345392 SPRR2EP22531 72 aa5.39□□□□□ -1.55
VHL-202ENST00000345392 SPRR2BP35325 72 aa5.39□□□□□ -1.55
VHL-202ENST00000345392 SPRR2AP35326 72 aa5.39□□□□□ -1.55
VHL-202ENST00000345392 LCE1AQ5T7P2 110 aa5.35□□□□□ -1.55
VHL-202ENST00000345392 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
VHL-202ENST00000345392 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
VHL-202ENST00000345392 NEBP20929 6669 aa5.22□□□□□ -1.57
VHL-202ENST00000345392 SPRR2DP22532 72 aa5.18□□□□□ -1.58
VHL-202ENST00000345392 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
VHL-202ENST00000345392 MT1AP04731 61 aa5.14□□□□□ -1.59
VHL-202ENST00000345392 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
VHL-202ENST00000345392 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
VHL-202ENST00000345392 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
VHL-202ENST00000345392 PRM1P04553 51 aa5.03□□□□□ -1.6
VHL-202ENST00000345392 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
VHL-202ENST00000345392 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
VHL-202ENST00000345392 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
VHL-202ENST00000345392 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
VHL-202ENST00000345392 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
VHL-202ENST00000345392 MT4P47944 62 aa4.61□□□□□ -1.67
VHL-202ENST00000345392 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
VHL-202ENST00000345392 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
VHL-202ENST00000345392 MT3P25713 68 aa4.49□□□□□ -1.69
VHL-202ENST00000345392 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
VHL-202ENST00000345392 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
VHL-202ENST00000345392 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
VHL-202ENST00000345392 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
VHL-202ENST00000345392 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
VHL-202ENST00000345392 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
VHL-202ENST00000345392 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
VHL-202ENST00000345392 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
VHL-202ENST00000345392 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
VHL-202ENST00000345392 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
VHL-202ENST00000345392 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
VHL-202ENST00000345392 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
VHL-202ENST00000345392 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
VHL-202ENST00000345392 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
VHL-202ENST00000345392 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
VHL-202ENST00000345392 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
VHL-202ENST00000345392 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
VHL-202ENST00000345392 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
VHL-202ENST00000345392 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
VHL-202ENST00000345392 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
VHL-202ENST00000345392 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
VHL-202ENST00000345392 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
VHL-202ENST00000345392 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
VHL-202ENST00000345392 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
VHL-202ENST00000345392 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
VHL-202ENST00000345392 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
VHL-202ENST00000345392 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
VHL-202ENST00000345392 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
VHL-202ENST00000345392 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
VHL-202ENST00000345392 PHGR1C9JFL3 82 aa2.55□□□□□ -2
VHL-202ENST00000345392 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms