RNA–Protein interactions for RNA: ENST00000345097.8

FOXN3-202, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXN3, Length 7,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-202ENST00000345097 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
FOXN3-202ENST00000345097 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
FOXN3-202ENST00000345097 MT4P47944 62 aa2.9□□□□□ -1.95
FOXN3-202ENST00000345097 LCE2AQ5TA79 106 aaPredicted RBP2.89□□□□□ -1.95
FOXN3-202ENST00000345097 KRTAP19-6Q3LI70 58 aa2.89□□□□□ -1.95
FOXN3-202ENST00000345097 MT1MQ8N339 61 aa2.85□□□□□ -1.95
FOXN3-202ENST00000345097 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
FOXN3-202ENST00000345097 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
FOXN3-202ENST00000345097 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
FOXN3-202ENST00000345097 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
FOXN3-202ENST00000345097 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
FOXN3-202ENST00000345097 KRTAP9-6A0A140TA67 174 aa2.76□□□□□ -1.97
FOXN3-202ENST00000345097 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
FOXN3-202ENST00000345097 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
FOXN3-202ENST00000345097 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
FOXN3-202ENST00000345097 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
FOXN3-202ENST00000345097 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
FOXN3-202ENST00000345097 UBR4Q5T4S7 5183 aa2.74□□□□□ -1.97
FOXN3-202ENST00000345097 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
FOXN3-202ENST00000345097 PRM1P04553 51 aa2.71□□□□□ -1.98
FOXN3-202ENST00000345097 MT3P25713 68 aa2.7□□□□□ -1.98
FOXN3-202ENST00000345097 KRTAP4-9Q9BYQ8 210 aa2.7□□□□□ -1.98
FOXN3-202ENST00000345097 LCE1DQ5T752 114 aa2.7□□□□□ -1.98
FOXN3-202ENST00000345097 KMT2DO14686 5537 aa2.66□□□□□ -1.98
FOXN3-202ENST00000345097 KRTAP2-3P0C7H8 128 aa2.65□□□□□ -1.98
FOXN3-202ENST00000345097 KRTAP2-4Q9BYR9 128 aa2.65□□□□□ -1.98
FOXN3-202ENST00000345097 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.98
FOXN3-202ENST00000345097 RNF213Q63HN8 5207 aa2.65□□□□□ -1.99
FOXN3-202ENST00000345097 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
FOXN3-202ENST00000345097 KRTAP9-7A8MTY7 169 aa2.61□□□□□ -1.99
FOXN3-202ENST00000345097 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
FOXN3-202ENST00000345097 MT1AP04731 61 aa2.55□□□□□ -2
FOXN3-202ENST00000345097 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
FOXN3-202ENST00000345097 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.53□□□□□ -2
FOXN3-202ENST00000345097 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
FOXN3-202ENST00000345097 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
FOXN3-202ENST00000345097 LCE4AQ5TA78 99 aa2.46□□□□□ -2.02
FOXN3-202ENST00000345097 KRTAP9-4Q9BYQ2 154 aa2.44□□□□□ -2.02
FOXN3-202ENST00000345097 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
FOXN3-202ENST00000345097 USH2AO75445 5202 aa2.36□□□□□ -2.03
FOXN3-202ENST00000345097 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
FOXN3-202ENST00000345097 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
FOXN3-202ENST00000345097 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
FOXN3-202ENST00000345097 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
FOXN3-202ENST00000345097 KRTAP4-6Q9BYQ5 205 aa2.22□□□□□ -2.05
FOXN3-202ENST00000345097 SSPOA2VEC9 5147 aa2.22□□□□□ -2.05
FOXN3-202ENST00000345097 KRTAP5-9P26371 169 aa2.22□□□□□ -2.05
FOXN3-202ENST00000345097 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
FOXN3-202ENST00000345097 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
FOXN3-202ENST00000345097 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
FOXN3-202ENST00000345097 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
FOXN3-202ENST00000345097 NEBP20929 6669 aa2.02□□□□□ -2.09
FOXN3-202ENST00000345097 KRTAP4-11Q9BYQ6 195 aa2□□□□□ -2.09
FOXN3-202ENST00000345097 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
FOXN3-202ENST00000345097 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
FOXN3-202ENST00000345097 KRTAP5-4Q6L8H1 288 aa1.93□□□□□ -2.1
FOXN3-202ENST00000345097 KRTAP4-12Q9BQ66 201 aa1.9□□□□□ -2.1
FOXN3-202ENST00000345097 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
FOXN3-202ENST00000345097 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
FOXN3-202ENST00000345097 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
FOXN3-202ENST00000345097 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
FOXN3-202ENST00000345097 KRTAP5-3Q6L8H2 238 aa1.66□□□□□ -2.14
FOXN3-202ENST00000345097 KRTAP5-8O75690 187 aa1.59□□□□□ -2.16
FOXN3-202ENST00000345097 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
FOXN3-202ENST00000345097 HMCN1Q96RW7 5635 aa1.54□□□□□ -2.16
FOXN3-202ENST00000345097 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
FOXN3-202ENST00000345097 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
FOXN3-202ENST00000345097 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
FOXN3-202ENST00000345097 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
FOXN3-202ENST00000345097 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
FOXN3-202ENST00000345097 KRTAP5-1Q6L8H4 278 aa1.41□□□□□ -2.18
FOXN3-202ENST00000345097 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
FOXN3-202ENST00000345097 KRTAP5-11Q6L8G4 156 aa1.31□□□□□ -2.2
FOXN3-202ENST00000345097 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
FOXN3-202ENST00000345097 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
FOXN3-202ENST00000345097 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
FOXN3-202ENST00000345097 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 75.2 ms