RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
CUL3-202ENST00000344951 MT1MQ8N339 61 aa4.55□□□□□ -1.68
CUL3-202ENST00000344951 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
CUL3-202ENST00000344951 KRTAP9-2Q9BYQ4 174 aa4.52□□□□□ -1.69
CUL3-202ENST00000344951 PCLOQ9Y6V0 5065 aa4.5□□□□□ -1.69
CUL3-202ENST00000344951 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
CUL3-202ENST00000344951 BIRC6Q9NR09 4857 aa4.43□□□□□ -1.7
CUL3-202ENST00000344951 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
CUL3-202ENST00000344951 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
CUL3-202ENST00000344951 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
CUL3-202ENST00000344951 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
CUL3-202ENST00000344951 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
CUL3-202ENST00000344951 KRTAP20-1Q3LI63 56 aa4.34□□□□□ -1.72
CUL3-202ENST00000344951 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
CUL3-202ENST00000344951 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
CUL3-202ENST00000344951 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
CUL3-202ENST00000344951 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
CUL3-202ENST00000344951 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
CUL3-202ENST00000344951 FSIP2Q5CZC0 6907 aa4.22□□□□□ -1.73
CUL3-202ENST00000344951 MT1AP04731 61 aa4.21□□□□□ -1.73
CUL3-202ENST00000344951 ABCA13Q86UQ4 5058 aa4.21□□□□□ -1.74
CUL3-202ENST00000344951 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
CUL3-202ENST00000344951 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.74
CUL3-202ENST00000344951 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
CUL3-202ENST00000344951 EPPK1P58107 5090 aaKnown RBP4.13□□□□□ -1.75
CUL3-202ENST00000344951 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
CUL3-202ENST00000344951 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
CUL3-202ENST00000344951 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
CUL3-202ENST00000344951 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
CUL3-202ENST00000344951 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
CUL3-202ENST00000344951 UBR4Q5T4S7 5183 aa4.03□□□□□ -1.76
CUL3-202ENST00000344951 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
CUL3-202ENST00000344951 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
CUL3-202ENST00000344951 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
CUL3-202ENST00000344951 MUC2Q02817 5179 aa3.86□□□□□ -1.79
CUL3-202ENST00000344951 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
CUL3-202ENST00000344951 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
CUL3-202ENST00000344951 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
CUL3-202ENST00000344951 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
CUL3-202ENST00000344951 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
CUL3-202ENST00000344951 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
CUL3-202ENST00000344951 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
CUL3-202ENST00000344951 KMT2DO14686 5537 aa3.54□□□□□ -1.84
CUL3-202ENST00000344951 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
CUL3-202ENST00000344951 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
CUL3-202ENST00000344951 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
CUL3-202ENST00000344951 USH2AO75445 5202 aa3.5□□□□□ -1.85
CUL3-202ENST00000344951 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
CUL3-202ENST00000344951 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CUL3-202ENST00000344951 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
CUL3-202ENST00000344951 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
CUL3-202ENST00000344951 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
CUL3-202ENST00000344951 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
CUL3-202ENST00000344951 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CUL3-202ENST00000344951 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
CUL3-202ENST00000344951 NEBP20929 6669 aa3.03□□□□□ -1.92
CUL3-202ENST00000344951 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
CUL3-202ENST00000344951 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
CUL3-202ENST00000344951 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
CUL3-202ENST00000344951 PHGR1C9JFL3 82 aa2.55□□□□□ -2
CUL3-202ENST00000344951 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
CUL3-202ENST00000344951 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
CUL3-202ENST00000344951 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
CUL3-202ENST00000344951 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
CUL3-202ENST00000344951 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
CUL3-202ENST00000344951 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
CUL3-202ENST00000344951 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
CUL3-202ENST00000344951 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
CUL3-202ENST00000344951 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
CUL3-202ENST00000344951 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
CUL3-202ENST00000344951 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
CUL3-202ENST00000344951 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
CUL3-202ENST00000344951 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
CUL3-202ENST00000344951 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
CUL3-202ENST00000344951 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
CUL3-202ENST00000344951 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
CUL3-202ENST00000344951 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 105.3 ms