RNA–Protein interactions for RNA: ENST00000344576.6

EGFR-203, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-203ENST00000344576 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
EGFR-203ENST00000344576 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
EGFR-203ENST00000344576 MT1EP04732 61 aa5.46□□□□□ -1.53
EGFR-203ENST00000344576 MT1LQ93083 61 aa5.43□□□□□ -1.54
EGFR-203ENST00000344576 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
EGFR-203ENST00000344576 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
EGFR-203ENST00000344576 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
EGFR-203ENST00000344576 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
EGFR-203ENST00000344576 DSTQ03001 7570 aaKnown RBP5.32□□□□□ -1.56
EGFR-203ENST00000344576 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
EGFR-203ENST00000344576 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
EGFR-203ENST00000344576 MT1GP13640 62 aa5.22□□□□□ -1.57
EGFR-203ENST00000344576 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
EGFR-203ENST00000344576 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
EGFR-203ENST00000344576 MT1MQ8N339 61 aa5.14□□□□□ -1.59
EGFR-203ENST00000344576 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
EGFR-203ENST00000344576 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
EGFR-203ENST00000344576 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
EGFR-203ENST00000344576 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
EGFR-203ENST00000344576 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
EGFR-203ENST00000344576 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
EGFR-203ENST00000344576 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
EGFR-203ENST00000344576 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
EGFR-203ENST00000344576 SPRR2EP22531 72 aa4.92□□□□□ -1.62
EGFR-203ENST00000344576 SPRR2BP35325 72 aa4.92□□□□□ -1.62
EGFR-203ENST00000344576 SPRR2AP35326 72 aa4.92□□□□□ -1.62
EGFR-203ENST00000344576 LCE3BQ5TA77 95 aa4.9□□□□□ -1.62
EGFR-203ENST00000344576 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
EGFR-203ENST00000344576 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
EGFR-203ENST00000344576 SPRR2DP22532 72 aa4.71□□□□□ -1.66
EGFR-203ENST00000344576 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
EGFR-203ENST00000344576 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
EGFR-203ENST00000344576 MT1AP04731 61 aa4.6□□□□□ -1.67
EGFR-203ENST00000344576 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.68
EGFR-203ENST00000344576 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
EGFR-203ENST00000344576 PRM1P04553 51 aa4.56□□□□□ -1.68
EGFR-203ENST00000344576 NEBP20929 6669 aa4.54□□□□□ -1.68
EGFR-203ENST00000344576 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
EGFR-203ENST00000344576 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
EGFR-203ENST00000344576 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
EGFR-203ENST00000344576 MT4P47944 62 aa4.22□□□□□ -1.73
EGFR-203ENST00000344576 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
EGFR-203ENST00000344576 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
EGFR-203ENST00000344576 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
EGFR-203ENST00000344576 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
EGFR-203ENST00000344576 MT3P25713 68 aa4.05□□□□□ -1.76
EGFR-203ENST00000344576 KRTAP20-1Q3LI63 56 aa4.04□□□□□ -1.76
EGFR-203ENST00000344576 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
EGFR-203ENST00000344576 LCE4AQ5TA78 99 aa4□□□□□ -1.77
EGFR-203ENST00000344576 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
EGFR-203ENST00000344576 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
EGFR-203ENST00000344576 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
EGFR-203ENST00000344576 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
EGFR-203ENST00000344576 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
EGFR-203ENST00000344576 MUC5ACP98088 5654 aa3.59□□□□□ -1.84
EGFR-203ENST00000344576 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
EGFR-203ENST00000344576 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
EGFR-203ENST00000344576 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
EGFR-203ENST00000344576 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
EGFR-203ENST00000344576 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
EGFR-203ENST00000344576 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
EGFR-203ENST00000344576 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
EGFR-203ENST00000344576 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
EGFR-203ENST00000344576 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
EGFR-203ENST00000344576 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
EGFR-203ENST00000344576 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.92
EGFR-203ENST00000344576 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
EGFR-203ENST00000344576 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
EGFR-203ENST00000344576 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
EGFR-203ENST00000344576 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
EGFR-203ENST00000344576 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
EGFR-203ENST00000344576 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
EGFR-203ENST00000344576 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
EGFR-203ENST00000344576 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
EGFR-203ENST00000344576 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.98
EGFR-203ENST00000344576 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
EGFR-203ENST00000344576 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 92.5 ms