RNA–Protein interactions for RNA: ENST00000343677.3

HIST1H1C-201, Transcript of histone cluster 1 H1 family member c, humanhuman

APPRIS P1 BASIC

Gene HIST1H1C, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1C-201ENST00000343677 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
HIST1H1C-201ENST00000343677 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
HIST1H1C-201ENST00000343677 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
HIST1H1C-201ENST00000343677 MT1LQ93083 61 aa4.47□□□□□ -1.69
HIST1H1C-201ENST00000343677 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
HIST1H1C-201ENST00000343677 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
HIST1H1C-201ENST00000343677 MT1GP13640 62 aa4.42□□□□□ -1.7
HIST1H1C-201ENST00000343677 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
HIST1H1C-201ENST00000343677 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
HIST1H1C-201ENST00000343677 MT1MQ8N339 61 aa4.39□□□□□ -1.71
HIST1H1C-201ENST00000343677 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
HIST1H1C-201ENST00000343677 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
HIST1H1C-201ENST00000343677 H3BS24 57 aa4.34□□□□□ -1.71
HIST1H1C-201ENST00000343677 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
HIST1H1C-201ENST00000343677 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
HIST1H1C-201ENST00000343677 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
HIST1H1C-201ENST00000343677 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
HIST1H1C-201ENST00000343677 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
HIST1H1C-201ENST00000343677 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
HIST1H1C-201ENST00000343677 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
HIST1H1C-201ENST00000343677 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
HIST1H1C-201ENST00000343677 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
HIST1H1C-201ENST00000343677 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
HIST1H1C-201ENST00000343677 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
HIST1H1C-201ENST00000343677 MT4P47944 62 aa4.01□□□□□ -1.77
HIST1H1C-201ENST00000343677 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
HIST1H1C-201ENST00000343677 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
HIST1H1C-201ENST00000343677 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
HIST1H1C-201ENST00000343677 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
HIST1H1C-201ENST00000343677 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
HIST1H1C-201ENST00000343677 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
HIST1H1C-201ENST00000343677 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
HIST1H1C-201ENST00000343677 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
HIST1H1C-201ENST00000343677 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
HIST1H1C-201ENST00000343677 MT1AP04731 61 aa3.8□□□□□ -1.8
HIST1H1C-201ENST00000343677 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
HIST1H1C-201ENST00000343677 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
HIST1H1C-201ENST00000343677 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
HIST1H1C-201ENST00000343677 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
HIST1H1C-201ENST00000343677 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
HIST1H1C-201ENST00000343677 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
HIST1H1C-201ENST00000343677 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
HIST1H1C-201ENST00000343677 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
HIST1H1C-201ENST00000343677 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
HIST1H1C-201ENST00000343677 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
HIST1H1C-201ENST00000343677 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
HIST1H1C-201ENST00000343677 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
HIST1H1C-201ENST00000343677 MT3P25713 68 aa3.45□□□□□ -1.86
HIST1H1C-201ENST00000343677 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
HIST1H1C-201ENST00000343677 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
HIST1H1C-201ENST00000343677 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
HIST1H1C-201ENST00000343677 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
HIST1H1C-201ENST00000343677 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
HIST1H1C-201ENST00000343677 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
HIST1H1C-201ENST00000343677 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
HIST1H1C-201ENST00000343677 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
HIST1H1C-201ENST00000343677 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
HIST1H1C-201ENST00000343677 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
HIST1H1C-201ENST00000343677 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
HIST1H1C-201ENST00000343677 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
HIST1H1C-201ENST00000343677 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
HIST1H1C-201ENST00000343677 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
HIST1H1C-201ENST00000343677 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
HIST1H1C-201ENST00000343677 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
HIST1H1C-201ENST00000343677 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
HIST1H1C-201ENST00000343677 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
HIST1H1C-201ENST00000343677 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
HIST1H1C-201ENST00000343677 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
HIST1H1C-201ENST00000343677 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
HIST1H1C-201ENST00000343677 INE1O15225 51 aa2.4□□□□□ -2.03
HIST1H1C-201ENST00000343677 PRM1P04553 51 aa2.4□□□□□ -2.03
HIST1H1C-201ENST00000343677 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
HIST1H1C-201ENST00000343677 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
HIST1H1C-201ENST00000343677 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
HIST1H1C-201ENST00000343677 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
HIST1H1C-201ENST00000343677 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
HIST1H1C-201ENST00000343677 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 13.3 ms