RNA–Protein interactions for RNA: ENST00000343150.9

CTSL-203, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 2,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-203ENST00000343150 KRTAP2-3P0C7H8 128 aa5.87□□□□□ -1.47
CTSL-203ENST00000343150 KRTAP2-4Q9BYR9 128 aa5.87□□□□□ -1.47
CTSL-203ENST00000343150 KRTAP2-1Q9BYU5 128 aa5.87□□□□□ -1.47
CTSL-203ENST00000343150 KMT2DO14686 5537 aa5.83□□□□□ -1.48
CTSL-203ENST00000343150 MT1LQ93083 61 aa5.74□□□□□ -1.49
CTSL-203ENST00000343150 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
CTSL-203ENST00000343150 MT1EP04732 61 aa5.72□□□□□ -1.49
CTSL-203ENST00000343150 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.5
CTSL-203ENST00000343150 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
CTSL-203ENST00000343150 KRTAP6-3Q3LI67 103 aa5.49□□□□□ -1.53
CTSL-203ENST00000343150 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
CTSL-203ENST00000343150 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
CTSL-203ENST00000343150 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
CTSL-203ENST00000343150 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
CTSL-203ENST00000343150 MT1MQ8N339 61 aa5.33□□□□□ -1.56
CTSL-203ENST00000343150 MT1GP13640 62 aa5.32□□□□□ -1.56
CTSL-203ENST00000343150 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
CTSL-203ENST00000343150 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
CTSL-203ENST00000343150 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
CTSL-203ENST00000343150 NEBP20929 6669 aa5.26□□□□□ -1.57
CTSL-203ENST00000343150 LCE1AQ5T7P2 110 aa5.25□□□□□ -1.57
CTSL-203ENST00000343150 MDN1Q9NU22 5596 aa5.25□□□□□ -1.57
CTSL-203ENST00000343150 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
CTSL-203ENST00000343150 SPRR2EP22531 72 aa5.19□□□□□ -1.58
CTSL-203ENST00000343150 SPRR2BP35325 72 aa5.19□□□□□ -1.58
CTSL-203ENST00000343150 SPRR2AP35326 72 aa5.19□□□□□ -1.58
CTSL-203ENST00000343150 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
CTSL-203ENST00000343150 SPRR2DP22532 72 aa5□□□□□ -1.61
CTSL-203ENST00000343150 MT1AP04731 61 aa4.98□□□□□ -1.61
CTSL-203ENST00000343150 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
CTSL-203ENST00000343150 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.63
CTSL-203ENST00000343150 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
CTSL-203ENST00000343150 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
CTSL-203ENST00000343150 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
CTSL-203ENST00000343150 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
CTSL-203ENST00000343150 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
CTSL-203ENST00000343150 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
CTSL-203ENST00000343150 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
CTSL-203ENST00000343150 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
CTSL-203ENST00000343150 PRM1P04553 51 aa4.6□□□□□ -1.67
CTSL-203ENST00000343150 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
CTSL-203ENST00000343150 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
CTSL-203ENST00000343150 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
CTSL-203ENST00000343150 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
CTSL-203ENST00000343150 MT4P47944 62 aa4.36□□□□□ -1.71
CTSL-203ENST00000343150 MT3P25713 68 aa4.34□□□□□ -1.71
CTSL-203ENST00000343150 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
CTSL-203ENST00000343150 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
CTSL-203ENST00000343150 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
CTSL-203ENST00000343150 KRTAP20-2Q3LI61 65 aa4.24□□□□□ -1.73
CTSL-203ENST00000343150 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
CTSL-203ENST00000343150 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
CTSL-203ENST00000343150 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
CTSL-203ENST00000343150 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
CTSL-203ENST00000343150 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
CTSL-203ENST00000343150 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
CTSL-203ENST00000343150 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
CTSL-203ENST00000343150 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
CTSL-203ENST00000343150 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
CTSL-203ENST00000343150 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
CTSL-203ENST00000343150 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
CTSL-203ENST00000343150 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
CTSL-203ENST00000343150 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
CTSL-203ENST00000343150 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
CTSL-203ENST00000343150 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
CTSL-203ENST00000343150 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
CTSL-203ENST00000343150 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
CTSL-203ENST00000343150 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
CTSL-203ENST00000343150 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
CTSL-203ENST00000343150 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
CTSL-203ENST00000343150 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CTSL-203ENST00000343150 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
CTSL-203ENST00000343150 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
CTSL-203ENST00000343150 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CTSL-203ENST00000343150 PHGR1C9JFL3 82 aa2.57□□□□□ -2
CTSL-203ENST00000343150 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
CTSL-203ENST00000343150 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 218 ms