RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -2
PRDM2-203ENST00000343137 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
PRDM2-203ENST00000343137 ABCA13Q86UQ4 5058 aa2.56□□□□□ -2
PRDM2-203ENST00000343137 LCE2AQ5TA79 106 aaPredicted RBP2.54□□□□□ -2
PRDM2-203ENST00000343137 HMCN2Q8NDA2 5059 aa2.52□□□□□ -2.01
PRDM2-203ENST00000343137 LOC100996750A0A140TA64 210 aa2.51□□□□□ -2.01
PRDM2-203ENST00000343137 EPPK1P58107 5090 aaKnown RBP2.5□□□□□ -2.01
PRDM2-203ENST00000343137 MT1AP04731 61 aa2.5□□□□□ -2.01
PRDM2-203ENST00000343137 FAT4Q6V0I7 4981 aa2.5□□□□□ -2.01
PRDM2-203ENST00000343137 PRM1P04553 51 aa2.49□□□□□ -2.01
PRDM2-203ENST00000343137 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
PRDM2-203ENST00000343137 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
PRDM2-203ENST00000343137 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
PRDM2-203ENST00000343137 LCE1AQ5T7P2 110 aa2.36□□□□□ -2.03
PRDM2-203ENST00000343137 MUC2Q02817 5179 aa2.36□□□□□ -2.03
PRDM2-203ENST00000343137 KRTAP9-2Q9BYQ4 174 aa2.36□□□□□ -2.03
PRDM2-203ENST00000343137 LCE5AQ5TCM9 118 aa2.34□□□□□ -2.04
PRDM2-203ENST00000343137 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
PRDM2-203ENST00000343137 MT4P47944 62 aa2.33□□□□□ -2.04
PRDM2-203ENST00000343137 KRTAP4-9Q9BYQ8 210 aa2.31□□□□□ -2.04
PRDM2-203ENST00000343137 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
PRDM2-203ENST00000343137 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
PRDM2-203ENST00000343137 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
PRDM2-203ENST00000343137 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
PRDM2-203ENST00000343137 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
PRDM2-203ENST00000343137 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
PRDM2-203ENST00000343137 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
PRDM2-203ENST00000343137 KRTAP9-6A0A140TA67 174 aa2.18□□□□□ -2.06
PRDM2-203ENST00000343137 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
PRDM2-203ENST00000343137 KRTAP9-7A8MTY7 169 aa2.14□□□□□ -2.07
PRDM2-203ENST00000343137 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
PRDM2-203ENST00000343137 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.08□□□□□ -2.08
PRDM2-203ENST00000343137 USH2AO75445 5202 aa2.07□□□□□ -2.08
PRDM2-203ENST00000343137 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
PRDM2-203ENST00000343137 KRTAP2-2Q9BYT5 123 aa2.06□□□□□ -2.08
PRDM2-203ENST00000343137 SYNE2Q8WXH0 6885 aaKnown RBP2.05□□□□□ -2.08
PRDM2-203ENST00000343137 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
PRDM2-203ENST00000343137 FSIP2Q5CZC0 6907 aa2.04□□□□□ -2.08
PRDM2-203ENST00000343137 KRTAP5-9P26371 169 aa2.03□□□□□ -2.08
PRDM2-203ENST00000343137 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
PRDM2-203ENST00000343137 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
PRDM2-203ENST00000343137 SSPOA2VEC9 5147 aa1.92□□□□□ -2.1
PRDM2-203ENST00000343137 KMT2DO14686 5537 aa1.91□□□□□ -2.1
PRDM2-203ENST00000343137 KRTAP4-6Q9BYQ5 205 aa1.89□□□□□ -2.11
PRDM2-203ENST00000343137 FCGBPQ9Y6R7 5405 aaPredicted RBP1.88□□□□□ -2.11
PRDM2-203ENST00000343137 KRTAP20-2Q3LI61 65 aa1.86□□□□□ -2.11
PRDM2-203ENST00000343137 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
PRDM2-203ENST00000343137 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
PRDM2-203ENST00000343137 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
PRDM2-203ENST00000343137 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
PRDM2-203ENST00000343137 KRTAP4-12Q9BQ66 201 aa1.78□□□□□ -2.12
PRDM2-203ENST00000343137 NEBP20929 6669 aa1.78□□□□□ -2.12
PRDM2-203ENST00000343137 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
PRDM2-203ENST00000343137 KRTAP9-9Q9BYP9 154 aa1.78□□□□□ -2.12
PRDM2-203ENST00000343137 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
PRDM2-203ENST00000343137 MUC12Q9UKN1 5478 aa1.75□□□□□ -2.13
PRDM2-203ENST00000343137 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
PRDM2-203ENST00000343137 MDN1Q9NU22 5596 aa1.67□□□□□ -2.14
PRDM2-203ENST00000343137 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
PRDM2-203ENST00000343137 KRTAP4-2Q9BYR5 136 aa1.55□□□□□ -2.16
PRDM2-203ENST00000343137 KRTAP5-3Q6L8H2 238 aa1.53□□□□□ -2.16
PRDM2-203ENST00000343137 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
PRDM2-203ENST00000343137 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
PRDM2-203ENST00000343137 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
PRDM2-203ENST00000343137 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
PRDM2-203ENST00000343137 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
PRDM2-203ENST00000343137 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
PRDM2-203ENST00000343137 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
PRDM2-203ENST00000343137 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
PRDM2-203ENST00000343137 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
PRDM2-203ENST00000343137 KRTAP5-1Q6L8H4 278 aa1.25□□□□□ -2.21
PRDM2-203ENST00000343137 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
PRDM2-203ENST00000343137 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
PRDM2-203ENST00000343137 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
PRDM2-203ENST00000343137 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
PRDM2-203ENST00000343137 KRTAP5-7Q6L8G8 165 aa1.09□□□□□ -2.23
PRDM2-203ENST00000343137 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 8.5 ms