RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
SNX18-202ENST00000343017 MT1EP04732 61 aa5.01□□□□□ -1.61
SNX18-202ENST00000343017 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
SNX18-202ENST00000343017 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
SNX18-202ENST00000343017 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
SNX18-202ENST00000343017 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
SNX18-202ENST00000343017 MT1GP13640 62 aa4.91□□□□□ -1.62
SNX18-202ENST00000343017 MACF1Q9UPN3 7388 aaKnown RBP4.91□□□□□ -1.62
SNX18-202ENST00000343017 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
SNX18-202ENST00000343017 LCE2DQ5TA82 110 aaPredicted RBP4.85□□□□□ -1.63
SNX18-202ENST00000343017 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
SNX18-202ENST00000343017 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
SNX18-202ENST00000343017 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
SNX18-202ENST00000343017 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
SNX18-202ENST00000343017 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
SNX18-202ENST00000343017 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
SNX18-202ENST00000343017 MDN1Q9NU22 5596 aa4.71□□□□□ -1.65
SNX18-202ENST00000343017 MT1MQ8N339 61 aa4.67□□□□□ -1.66
SNX18-202ENST00000343017 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
SNX18-202ENST00000343017 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
SNX18-202ENST00000343017 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
SNX18-202ENST00000343017 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
SNX18-202ENST00000343017 PRM1P04553 51 aa4.45□□□□□ -1.7
SNX18-202ENST00000343017 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
SNX18-202ENST00000343017 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.7
SNX18-202ENST00000343017 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
SNX18-202ENST00000343017 SPRR2EP22531 72 aa4.39□□□□□ -1.71
SNX18-202ENST00000343017 SPRR2BP35325 72 aa4.39□□□□□ -1.71
SNX18-202ENST00000343017 SPRR2AP35326 72 aa4.39□□□□□ -1.71
SNX18-202ENST00000343017 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
SNX18-202ENST00000343017 MT1AP04731 61 aa4.35□□□□□ -1.71
SNX18-202ENST00000343017 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
SNX18-202ENST00000343017 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
SNX18-202ENST00000343017 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
SNX18-202ENST00000343017 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
SNX18-202ENST00000343017 SPRR2DP22532 72 aa4.2□□□□□ -1.74
SNX18-202ENST00000343017 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
SNX18-202ENST00000343017 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
SNX18-202ENST00000343017 NEBP20929 6669 aa3.97□□□□□ -1.77
SNX18-202ENST00000343017 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
SNX18-202ENST00000343017 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
SNX18-202ENST00000343017 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
SNX18-202ENST00000343017 MT4P47944 62 aa3.81□□□□□ -1.8
SNX18-202ENST00000343017 MT3P25713 68 aa3.74□□□□□ -1.81
SNX18-202ENST00000343017 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
SNX18-202ENST00000343017 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.83
SNX18-202ENST00000343017 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
SNX18-202ENST00000343017 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
SNX18-202ENST00000343017 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
SNX18-202ENST00000343017 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
SNX18-202ENST00000343017 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
SNX18-202ENST00000343017 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
SNX18-202ENST00000343017 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
SNX18-202ENST00000343017 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
SNX18-202ENST00000343017 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
SNX18-202ENST00000343017 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
SNX18-202ENST00000343017 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
SNX18-202ENST00000343017 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
SNX18-202ENST00000343017 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
SNX18-202ENST00000343017 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
SNX18-202ENST00000343017 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
SNX18-202ENST00000343017 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
SNX18-202ENST00000343017 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
SNX18-202ENST00000343017 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SNX18-202ENST00000343017 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SNX18-202ENST00000343017 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
SNX18-202ENST00000343017 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
SNX18-202ENST00000343017 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
SNX18-202ENST00000343017 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
SNX18-202ENST00000343017 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
SNX18-202ENST00000343017 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
SNX18-202ENST00000343017 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
SNX18-202ENST00000343017 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
SNX18-202ENST00000343017 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
SNX18-202ENST00000343017 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
SNX18-202ENST00000343017 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SNX18-202ENST00000343017 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms