RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
SOX12-201ENST00000342665 SPRR2DP22532 72 aa6.51□□□□□ -1.37
SOX12-201ENST00000342665 KRTAP19-6Q3LI70 58 aa6.46□□□□□ -1.37
SOX12-201ENST00000342665 LCE3DQ9BYE3 92 aa6.46□□□□□ -1.38
SOX12-201ENST00000342665 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
SOX12-201ENST00000342665 MT1MQ8N339 61 aa6.38□□□□□ -1.39
SOX12-201ENST00000342665 LCE3EQ5T5B0 92 aa6.37□□□□□ -1.39
SOX12-201ENST00000342665 KRTAP19-7Q3SYF9 63 aa6.35□□□□□ -1.39
SOX12-201ENST00000342665 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
SOX12-201ENST00000342665 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
SOX12-201ENST00000342665 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
SOX12-201ENST00000342665 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
SOX12-201ENST00000342665 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
SOX12-201ENST00000342665 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
SOX12-201ENST00000342665 MT3P25713 68 aa6.03□□□□□ -1.44
SOX12-201ENST00000342665 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
SOX12-201ENST00000342665 MT1AP04731 61 aa5.92□□□□□ -1.46
SOX12-201ENST00000342665 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
SOX12-201ENST00000342665 PRM1P04553 51 aa5.83□□□□□ -1.48
SOX12-201ENST00000342665 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
SOX12-201ENST00000342665 MT4P47944 62 aa5.76□□□□□ -1.49
SOX12-201ENST00000342665 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
SOX12-201ENST00000342665 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
SOX12-201ENST00000342665 USH2AO75445 5202 aa5.72□□□□□ -1.49
SOX12-201ENST00000342665 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.49
SOX12-201ENST00000342665 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
SOX12-201ENST00000342665 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
SOX12-201ENST00000342665 KMT2DO14686 5537 aa5.65□□□□□ -1.5
SOX12-201ENST00000342665 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
SOX12-201ENST00000342665 KRTAP6-1Q3LI64 71 aa5.6□□□□□ -1.51
SOX12-201ENST00000342665 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
SOX12-201ENST00000342665 LCE1BQ5T7P3 118 aa5.49□□□□□ -1.53
SOX12-201ENST00000342665 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
SOX12-201ENST00000342665 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
SOX12-201ENST00000342665 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
SOX12-201ENST00000342665 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
SOX12-201ENST00000342665 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
SOX12-201ENST00000342665 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
SOX12-201ENST00000342665 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
SOX12-201ENST00000342665 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
SOX12-201ENST00000342665 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
SOX12-201ENST00000342665 SSPOA2VEC9 5147 aa5.15□□□□□ -1.58
SOX12-201ENST00000342665 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
SOX12-201ENST00000342665 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
SOX12-201ENST00000342665 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
SOX12-201ENST00000342665 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
SOX12-201ENST00000342665 MUC19Q7Z5P9 8384 aa4.64□□□□□ -1.67
SOX12-201ENST00000342665 NEBP20929 6669 aa4.63□□□□□ -1.67
SOX12-201ENST00000342665 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
SOX12-201ENST00000342665 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
SOX12-201ENST00000342665 LCE1CQ5T751 118 aa4.45□□□□□ -1.7
SOX12-201ENST00000342665 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
SOX12-201ENST00000342665 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
SOX12-201ENST00000342665 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
SOX12-201ENST00000342665 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
SOX12-201ENST00000342665 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
SOX12-201ENST00000342665 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
SOX12-201ENST00000342665 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
SOX12-201ENST00000342665 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
SOX12-201ENST00000342665 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
SOX12-201ENST00000342665 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
SOX12-201ENST00000342665 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
SOX12-201ENST00000342665 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
SOX12-201ENST00000342665 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
SOX12-201ENST00000342665 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
SOX12-201ENST00000342665 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
SOX12-201ENST00000342665 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
SOX12-201ENST00000342665 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
SOX12-201ENST00000342665 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SOX12-201ENST00000342665 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
SOX12-201ENST00000342665 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
SOX12-201ENST00000342665 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
SOX12-201ENST00000342665 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
SOX12-201ENST00000342665 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
SOX12-201ENST00000342665 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
SOX12-201ENST00000342665 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
SOX12-201ENST00000342665 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 94.8 ms