RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 MUC12Q9UKN1 5478 aa6.65□□□□□ -1.35
CNTNAP3B-202ENST00000341990 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
CNTNAP3B-202ENST00000341990 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
CNTNAP3B-202ENST00000341990 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
CNTNAP3B-202ENST00000341990 LCE2DQ5TA82 110 aaPredicted RBP6.53□□□□□ -1.36
CNTNAP3B-202ENST00000341990 MT1GP13640 62 aa6.5□□□□□ -1.37
CNTNAP3B-202ENST00000341990 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
CNTNAP3B-202ENST00000341990 MT1MQ8N339 61 aa6.42□□□□□ -1.38
CNTNAP3B-202ENST00000341990 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
CNTNAP3B-202ENST00000341990 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
CNTNAP3B-202ENST00000341990 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
CNTNAP3B-202ENST00000341990 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
CNTNAP3B-202ENST00000341990 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
CNTNAP3B-202ENST00000341990 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
CNTNAP3B-202ENST00000341990 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
CNTNAP3B-202ENST00000341990 MDN1Q9NU22 5596 aa6□□□□□ -1.45
CNTNAP3B-202ENST00000341990 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
CNTNAP3B-202ENST00000341990 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
CNTNAP3B-202ENST00000341990 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
CNTNAP3B-202ENST00000341990 KRTAP6-1Q3LI64 71 aa5.89□□□□□ -1.47
CNTNAP3B-202ENST00000341990 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
CNTNAP3B-202ENST00000341990 MT1AP04731 61 aa5.73□□□□□ -1.49
CNTNAP3B-202ENST00000341990 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
CNTNAP3B-202ENST00000341990 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
CNTNAP3B-202ENST00000341990 LCE3DQ9BYE3 92 aa5.64□□□□□ -1.51
CNTNAP3B-202ENST00000341990 KRTAP5-9P26371 169 aa5.6□□□□□ -1.51
CNTNAP3B-202ENST00000341990 SPRR2EP22531 72 aa5.56□□□□□ -1.52
CNTNAP3B-202ENST00000341990 SPRR2BP35325 72 aa5.56□□□□□ -1.52
CNTNAP3B-202ENST00000341990 SPRR2AP35326 72 aa5.56□□□□□ -1.52
CNTNAP3B-202ENST00000341990 LCE3EQ5T5B0 92 aa5.56□□□□□ -1.52
CNTNAP3B-202ENST00000341990 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
CNTNAP3B-202ENST00000341990 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
CNTNAP3B-202ENST00000341990 PRM1P04553 51 aa5.41□□□□□ -1.54
CNTNAP3B-202ENST00000341990 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.55
CNTNAP3B-202ENST00000341990 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
CNTNAP3B-202ENST00000341990 SPRR2DP22532 72 aa5.3□□□□□ -1.56
CNTNAP3B-202ENST00000341990 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
CNTNAP3B-202ENST00000341990 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
CNTNAP3B-202ENST00000341990 MT3P25713 68 aa5.13□□□□□ -1.59
CNTNAP3B-202ENST00000341990 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
CNTNAP3B-202ENST00000341990 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
CNTNAP3B-202ENST00000341990 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
CNTNAP3B-202ENST00000341990 NEBP20929 6669 aa4.78□□□□□ -1.64
CNTNAP3B-202ENST00000341990 MT4P47944 62 aa4.76□□□□□ -1.65
CNTNAP3B-202ENST00000341990 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
CNTNAP3B-202ENST00000341990 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
CNTNAP3B-202ENST00000341990 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
CNTNAP3B-202ENST00000341990 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.68
CNTNAP3B-202ENST00000341990 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
CNTNAP3B-202ENST00000341990 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
CNTNAP3B-202ENST00000341990 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
CNTNAP3B-202ENST00000341990 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
CNTNAP3B-202ENST00000341990 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
CNTNAP3B-202ENST00000341990 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
CNTNAP3B-202ENST00000341990 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
CNTNAP3B-202ENST00000341990 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
CNTNAP3B-202ENST00000341990 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
CNTNAP3B-202ENST00000341990 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
CNTNAP3B-202ENST00000341990 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
CNTNAP3B-202ENST00000341990 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
CNTNAP3B-202ENST00000341990 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
CNTNAP3B-202ENST00000341990 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
CNTNAP3B-202ENST00000341990 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
CNTNAP3B-202ENST00000341990 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
CNTNAP3B-202ENST00000341990 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
CNTNAP3B-202ENST00000341990 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
CNTNAP3B-202ENST00000341990 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
CNTNAP3B-202ENST00000341990 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CNTNAP3B-202ENST00000341990 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
CNTNAP3B-202ENST00000341990 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CNTNAP3B-202ENST00000341990 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
CNTNAP3B-202ENST00000341990 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
CNTNAP3B-202ENST00000341990 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
CNTNAP3B-202ENST00000341990 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
CNTNAP3B-202ENST00000341990 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
CNTNAP3B-202ENST00000341990 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
CNTNAP3B-202ENST00000341990 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 88.3 ms