RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
COL11A2-201ENST00000341947 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
COL11A2-201ENST00000341947 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
COL11A2-201ENST00000341947 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
COL11A2-201ENST00000341947 KMT2CQ8NEZ4 4911 aaKnown RBP4.48□□□□□ -1.69
COL11A2-201ENST00000341947 LCE2AQ5TA79 106 aaPredicted RBP4.48□□□□□ -1.69
COL11A2-201ENST00000341947 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
COL11A2-201ENST00000341947 MT1AP04731 61 aa4.44□□□□□ -1.7
COL11A2-201ENST00000341947 FLGP20930 4061 aaPredicted RBP4.42□□□□□ -1.7
COL11A2-201ENST00000341947 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.7
COL11A2-201ENST00000341947 EPPK1P58107 5090 aaKnown RBP4.39□□□□□ -1.71
COL11A2-201ENST00000341947 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
COL11A2-201ENST00000341947 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
COL11A2-201ENST00000341947 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
COL11A2-201ENST00000341947 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
COL11A2-201ENST00000341947 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
COL11A2-201ENST00000341947 ABCA13Q86UQ4 5058 aa4.3□□□□□ -1.72
COL11A2-201ENST00000341947 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
COL11A2-201ENST00000341947 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
COL11A2-201ENST00000341947 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.74
COL11A2-201ENST00000341947 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
COL11A2-201ENST00000341947 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
COL11A2-201ENST00000341947 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
COL11A2-201ENST00000341947 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
COL11A2-201ENST00000341947 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
COL11A2-201ENST00000341947 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
COL11A2-201ENST00000341947 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
COL11A2-201ENST00000341947 RNF213Q63HN8 5207 aa4.07□□□□□ -1.76
COL11A2-201ENST00000341947 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
COL11A2-201ENST00000341947 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
COL11A2-201ENST00000341947 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
COL11A2-201ENST00000341947 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
COL11A2-201ENST00000341947 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
COL11A2-201ENST00000341947 HMCN2Q8NDA2 5059 aa4.01□□□□□ -1.77
COL11A2-201ENST00000341947 UBR4Q5T4S7 5183 aa4.01□□□□□ -1.77
COL11A2-201ENST00000341947 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
COL11A2-201ENST00000341947 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
COL11A2-201ENST00000341947 MUC2Q02817 5179 aa3.87□□□□□ -1.79
COL11A2-201ENST00000341947 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
COL11A2-201ENST00000341947 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
COL11A2-201ENST00000341947 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
COL11A2-201ENST00000341947 NEBP20929 6669 aa3.49□□□□□ -1.85
COL11A2-201ENST00000341947 USH2AO75445 5202 aa3.4□□□□□ -1.86
COL11A2-201ENST00000341947 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
COL11A2-201ENST00000341947 KMT2DO14686 5537 aa3.38□□□□□ -1.87
COL11A2-201ENST00000341947 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
COL11A2-201ENST00000341947 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
COL11A2-201ENST00000341947 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
COL11A2-201ENST00000341947 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
COL11A2-201ENST00000341947 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
COL11A2-201ENST00000341947 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
COL11A2-201ENST00000341947 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
COL11A2-201ENST00000341947 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
COL11A2-201ENST00000341947 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
COL11A2-201ENST00000341947 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
COL11A2-201ENST00000341947 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
COL11A2-201ENST00000341947 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
COL11A2-201ENST00000341947 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
COL11A2-201ENST00000341947 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
COL11A2-201ENST00000341947 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
COL11A2-201ENST00000341947 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
COL11A2-201ENST00000341947 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
COL11A2-201ENST00000341947 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
COL11A2-201ENST00000341947 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
COL11A2-201ENST00000341947 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
COL11A2-201ENST00000341947 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
COL11A2-201ENST00000341947 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
COL11A2-201ENST00000341947 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
COL11A2-201ENST00000341947 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
COL11A2-201ENST00000341947 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
COL11A2-201ENST00000341947 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
COL11A2-201ENST00000341947 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
COL11A2-201ENST00000341947 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
COL11A2-201ENST00000341947 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
COL11A2-201ENST00000341947 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
COL11A2-201ENST00000341947 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
COL11A2-201ENST00000341947 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 93.8 ms