RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
TNFRSF12A-202ENST00000341627 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
TNFRSF12A-202ENST00000341627 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
TNFRSF12A-202ENST00000341627 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
TNFRSF12A-202ENST00000341627 BRK1Q8WUW1 75 aa5.57□□□□□ -1.52
TNFRSF12A-202ENST00000341627 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
TNFRSF12A-202ENST00000341627 MT1GP13640 62 aa5.54□□□□□ -1.52
TNFRSF12A-202ENST00000341627 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
TNFRSF12A-202ENST00000341627 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
TNFRSF12A-202ENST00000341627 MT1LQ93083 61 aa5.5□□□□□ -1.53
TNFRSF12A-202ENST00000341627 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
TNFRSF12A-202ENST00000341627 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
TNFRSF12A-202ENST00000341627 H3BS24 57 aa5.48□□□□□ -1.53
TNFRSF12A-202ENST00000341627 ROMO1P60602 79 aa5.44□□□□□ -1.54
TNFRSF12A-202ENST00000341627 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
TNFRSF12A-202ENST00000341627 MT1MQ8N339 61 aa5.42□□□□□ -1.54
TNFRSF12A-202ENST00000341627 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
TNFRSF12A-202ENST00000341627 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
TNFRSF12A-202ENST00000341627 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
TNFRSF12A-202ENST00000341627 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
TNFRSF12A-202ENST00000341627 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
TNFRSF12A-202ENST00000341627 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
TNFRSF12A-202ENST00000341627 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
TNFRSF12A-202ENST00000341627 HMCN1Q96RW7 5635 aa5.19□□□□□ -1.58
TNFRSF12A-202ENST00000341627 LCE1DQ5T752 114 aa5.19□□□□□ -1.58
TNFRSF12A-202ENST00000341627 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
TNFRSF12A-202ENST00000341627 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
TNFRSF12A-202ENST00000341627 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
TNFRSF12A-202ENST00000341627 MT4P47944 62 aa5.12□□□□□ -1.59
TNFRSF12A-202ENST00000341627 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
TNFRSF12A-202ENST00000341627 KRTAP4-6Q9BYQ5 205 aa5.02□□□□□ -1.61
TNFRSF12A-202ENST00000341627 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
TNFRSF12A-202ENST00000341627 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
TNFRSF12A-202ENST00000341627 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
TNFRSF12A-202ENST00000341627 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
TNFRSF12A-202ENST00000341627 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
TNFRSF12A-202ENST00000341627 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
TNFRSF12A-202ENST00000341627 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
TNFRSF12A-202ENST00000341627 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
TNFRSF12A-202ENST00000341627 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
TNFRSF12A-202ENST00000341627 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
TNFRSF12A-202ENST00000341627 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
TNFRSF12A-202ENST00000341627 MT1AP04731 61 aa4.7□□□□□ -1.66
TNFRSF12A-202ENST00000341627 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
TNFRSF12A-202ENST00000341627 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
TNFRSF12A-202ENST00000341627 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
TNFRSF12A-202ENST00000341627 KRTAP5-2Q701N4 177 aa4.5□□□□□ -1.69
TNFRSF12A-202ENST00000341627 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
TNFRSF12A-202ENST00000341627 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
TNFRSF12A-202ENST00000341627 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
TNFRSF12A-202ENST00000341627 MT3P25713 68 aa4.3□□□□□ -1.72
TNFRSF12A-202ENST00000341627 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
TNFRSF12A-202ENST00000341627 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
TNFRSF12A-202ENST00000341627 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
TNFRSF12A-202ENST00000341627 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
TNFRSF12A-202ENST00000341627 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
TNFRSF12A-202ENST00000341627 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
TNFRSF12A-202ENST00000341627 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
TNFRSF12A-202ENST00000341627 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
TNFRSF12A-202ENST00000341627 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
TNFRSF12A-202ENST00000341627 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
TNFRSF12A-202ENST00000341627 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
TNFRSF12A-202ENST00000341627 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
TNFRSF12A-202ENST00000341627 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
TNFRSF12A-202ENST00000341627 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
TNFRSF12A-202ENST00000341627 INE1O15225 51 aa3.47□□□□□ -1.85
TNFRSF12A-202ENST00000341627 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
TNFRSF12A-202ENST00000341627 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
TNFRSF12A-202ENST00000341627 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
TNFRSF12A-202ENST00000341627 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
TNFRSF12A-202ENST00000341627 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
TNFRSF12A-202ENST00000341627 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
TNFRSF12A-202ENST00000341627 PRM1P04553 51 aa2.78□□□□□ -1.96
TNFRSF12A-202ENST00000341627 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
TNFRSF12A-202ENST00000341627 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
TNFRSF12A-202ENST00000341627 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
TNFRSF12A-202ENST00000341627 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 76.8 ms