RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 LCE3BQ5TA77 95 aa2.58□□□□□ -2
ATP2B4-201ENST00000341360 KRTAP19-6Q3LI70 58 aa2.57□□□□□ -2
ATP2B4-201ENST00000341360 FSIP2Q5CZC0 6907 aa2.56□□□□□ -2
ATP2B4-201ENST00000341360 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
ATP2B4-201ENST00000341360 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
ATP2B4-201ENST00000341360 LCE2AQ5TA79 106 aaPredicted RBP2.54□□□□□ -2
ATP2B4-201ENST00000341360 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2
ATP2B4-201ENST00000341360 MT1EP04732 61 aa2.53□□□□□ -2.01
ATP2B4-201ENST00000341360 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
ATP2B4-201ENST00000341360 KRTAP4-8Q9BYQ9 185 aa2.51□□□□□ -2.01
ATP2B4-201ENST00000341360 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
ATP2B4-201ENST00000341360 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
ATP2B4-201ENST00000341360 KRTAP2-1Q9BYU5 128 aa2.46□□□□□ -2.02
ATP2B4-201ENST00000341360 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
ATP2B4-201ENST00000341360 MT1MQ8N339 61 aa2.45□□□□□ -2.02
ATP2B4-201ENST00000341360 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
ATP2B4-201ENST00000341360 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.43□□□□□ -2.02
ATP2B4-201ENST00000341360 MT4P47944 62 aa2.43□□□□□ -2.02
ATP2B4-201ENST00000341360 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
ATP2B4-201ENST00000341360 LCE1AQ5T7P2 110 aa2.4□□□□□ -2.03
ATP2B4-201ENST00000341360 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
ATP2B4-201ENST00000341360 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
ATP2B4-201ENST00000341360 MT1AP04731 61 aa2.35□□□□□ -2.03
ATP2B4-201ENST00000341360 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
ATP2B4-201ENST00000341360 KRTAP2-2Q9BYT5 123 aa2.33□□□□□ -2.04
ATP2B4-201ENST00000341360 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
ATP2B4-201ENST00000341360 USH2AO75445 5202 aa2.32□□□□□ -2.04
ATP2B4-201ENST00000341360 LCE4AQ5TA78 99 aa2.26□□□□□ -2.05
ATP2B4-201ENST00000341360 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
ATP2B4-201ENST00000341360 KMT2DO14686 5537 aa2.22□□□□□ -2.05
ATP2B4-201ENST00000341360 LCE1DQ5T752 114 aa2.21□□□□□ -2.06
ATP2B4-201ENST00000341360 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
ATP2B4-201ENST00000341360 LOC100996750A0A140TA64 210 aa2.19□□□□□ -2.06
ATP2B4-201ENST00000341360 PRM1P04553 51 aa2.18□□□□□ -2.06
ATP2B4-201ENST00000341360 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
ATP2B4-201ENST00000341360 KRTAP4-9Q9BYQ8 210 aa2.17□□□□□ -2.06
ATP2B4-201ENST00000341360 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
ATP2B4-201ENST00000341360 LCE5AQ5TCM9 118 aa2.16□□□□□ -2.06
ATP2B4-201ENST00000341360 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
ATP2B4-201ENST00000341360 NEBP20929 6669 aa2.12□□□□□ -2.07
ATP2B4-201ENST00000341360 KRTAP9-4Q9BYQ2 154 aa2.12□□□□□ -2.07
ATP2B4-201ENST00000341360 FCGBPQ9Y6R7 5405 aaPredicted RBP2.08□□□□□ -2.08
ATP2B4-201ENST00000341360 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
ATP2B4-201ENST00000341360 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
ATP2B4-201ENST00000341360 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
ATP2B4-201ENST00000341360 KRTAP9-9Q9BYP9 154 aa1.99□□□□□ -2.09
ATP2B4-201ENST00000341360 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
ATP2B4-201ENST00000341360 KRTAP5-9P26371 169 aa1.97□□□□□ -2.09
ATP2B4-201ENST00000341360 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
ATP2B4-201ENST00000341360 LCE1EQ5T753 118 aa1.95□□□□□ -2.1
ATP2B4-201ENST00000341360 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
ATP2B4-201ENST00000341360 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
ATP2B4-201ENST00000341360 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
ATP2B4-201ENST00000341360 KRTAP4-6Q9BYQ5 205 aa1.79□□□□□ -2.12
ATP2B4-201ENST00000341360 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
ATP2B4-201ENST00000341360 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
ATP2B4-201ENST00000341360 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
ATP2B4-201ENST00000341360 KRTAP4-11Q9BYQ6 195 aa1.69□□□□□ -2.14
ATP2B4-201ENST00000341360 KRTAP5-3Q6L8H2 238 aa1.65□□□□□ -2.14
ATP2B4-201ENST00000341360 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
ATP2B4-201ENST00000341360 KRTAP4-12Q9BQ66 201 aa1.57□□□□□ -2.16
ATP2B4-201ENST00000341360 KRTAP4-2Q9BYR5 136 aa1.57□□□□□ -2.16
ATP2B4-201ENST00000341360 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
ATP2B4-201ENST00000341360 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
ATP2B4-201ENST00000341360 KRTAP5-2Q701N4 177 aa1.45□□□□□ -2.18
ATP2B4-201ENST00000341360 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
ATP2B4-201ENST00000341360 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
ATP2B4-201ENST00000341360 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
ATP2B4-201ENST00000341360 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
ATP2B4-201ENST00000341360 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
ATP2B4-201ENST00000341360 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
ATP2B4-201ENST00000341360 KRTAP5-1Q6L8H4 278 aa1.31□□□□□ -2.2
ATP2B4-201ENST00000341360 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
ATP2B4-201ENST00000341360 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.25□□□□□ -2.21
ATP2B4-201ENST00000341360 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
ATP2B4-201ENST00000341360 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
ATP2B4-201ENST00000341360 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 63.3 ms