RNA–Protein interactions for RNA: ENST00000341184.6

MGAT3-201, Transcript of mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MGAT3, Length 5,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MGAT3-201ENST00000341184 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
MGAT3-201ENST00000341184 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
MGAT3-201ENST00000341184 KRTAP12-4P60329 112 aa6.71□□□□□ -1.33
MGAT3-201ENST00000341184 SYNE1Q8NF91 8797 aaKnown RBP6.71□□□□□ -1.33
MGAT3-201ENST00000341184 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.35
MGAT3-201ENST00000341184 MT1MQ8N339 61 aa6.57□□□□□ -1.36
MGAT3-201ENST00000341184 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
MGAT3-201ENST00000341184 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
MGAT3-201ENST00000341184 LCE3DQ9BYE3 92 aa6.45□□□□□ -1.38
MGAT3-201ENST00000341184 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
MGAT3-201ENST00000341184 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.4
MGAT3-201ENST00000341184 LCE3EQ5T5B0 92 aa6.32□□□□□ -1.4
MGAT3-201ENST00000341184 MT4P47944 62 aa6.26□□□□□ -1.41
MGAT3-201ENST00000341184 MT3P25713 68 aa6.15□□□□□ -1.43
MGAT3-201ENST00000341184 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
MGAT3-201ENST00000341184 USH2AO75445 5202 aa6.09□□□□□ -1.43
MGAT3-201ENST00000341184 MT1AP04731 61 aa6□□□□□ -1.45
MGAT3-201ENST00000341184 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
MGAT3-201ENST00000341184 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
MGAT3-201ENST00000341184 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
MGAT3-201ENST00000341184 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
MGAT3-201ENST00000341184 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
MGAT3-201ENST00000341184 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
MGAT3-201ENST00000341184 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
MGAT3-201ENST00000341184 DSTQ03001 7570 aaKnown RBP5.9□□□□□ -1.46
MGAT3-201ENST00000341184 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.47
MGAT3-201ENST00000341184 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
MGAT3-201ENST00000341184 KRTAP2-3P0C7H8 128 aa5.88□□□□□ -1.47
MGAT3-201ENST00000341184 KRTAP2-4Q9BYR9 128 aa5.88□□□□□ -1.47
MGAT3-201ENST00000341184 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
MGAT3-201ENST00000341184 KMT2DO14686 5537 aa5.84□□□□□ -1.47
MGAT3-201ENST00000341184 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
MGAT3-201ENST00000341184 LCE1BQ5T7P3 118 aa5.79□□□□□ -1.48
MGAT3-201ENST00000341184 KRTAP20-1Q3LI63 56 aa5.78□□□□□ -1.48
MGAT3-201ENST00000341184 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
MGAT3-201ENST00000341184 PRM1P04553 51 aa5.75□□□□□ -1.49
MGAT3-201ENST00000341184 MACF1Q9UPN3 7388 aaKnown RBP5.66□□□□□ -1.5
MGAT3-201ENST00000341184 KRTAP6-2Q3LI66 62 aa5.61□□□□□ -1.51
MGAT3-201ENST00000341184 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
MGAT3-201ENST00000341184 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
MGAT3-201ENST00000341184 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
MGAT3-201ENST00000341184 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
MGAT3-201ENST00000341184 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
MGAT3-201ENST00000341184 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
MGAT3-201ENST00000341184 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
MGAT3-201ENST00000341184 NEBP20929 6669 aa5.21□□□□□ -1.58
MGAT3-201ENST00000341184 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
MGAT3-201ENST00000341184 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
MGAT3-201ENST00000341184 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
MGAT3-201ENST00000341184 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
MGAT3-201ENST00000341184 LCE1FQ5T754 118 aa4.76□□□□□ -1.65
MGAT3-201ENST00000341184 MUC19Q7Z5P9 8384 aa4.7□□□□□ -1.66
MGAT3-201ENST00000341184 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
MGAT3-201ENST00000341184 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
MGAT3-201ENST00000341184 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
MGAT3-201ENST00000341184 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
MGAT3-201ENST00000341184 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
MGAT3-201ENST00000341184 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
MGAT3-201ENST00000341184 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
MGAT3-201ENST00000341184 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
MGAT3-201ENST00000341184 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
MGAT3-201ENST00000341184 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
MGAT3-201ENST00000341184 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
MGAT3-201ENST00000341184 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.78
MGAT3-201ENST00000341184 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
MGAT3-201ENST00000341184 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
MGAT3-201ENST00000341184 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
MGAT3-201ENST00000341184 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
MGAT3-201ENST00000341184 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
MGAT3-201ENST00000341184 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
MGAT3-201ENST00000341184 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
MGAT3-201ENST00000341184 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
MGAT3-201ENST00000341184 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
MGAT3-201ENST00000341184 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
MGAT3-201ENST00000341184 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
MGAT3-201ENST00000341184 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
MGAT3-201ENST00000341184 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms