RNA–Protein interactions for RNA: ENST00000340913.10

HNRNPA1-202, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 1 (best) BASIC

Gene HNRNPA1, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-202ENST00000340913 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
HNRNPA1-202ENST00000340913 KMT2DO14686 5537 aa5.09□□□□□ -1.59
HNRNPA1-202ENST00000340913 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.6
HNRNPA1-202ENST00000340913 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
HNRNPA1-202ENST00000340913 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
HNRNPA1-202ENST00000340913 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
HNRNPA1-202ENST00000340913 USH2AO75445 5202 aa5□□□□□ -1.61
HNRNPA1-202ENST00000340913 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
HNRNPA1-202ENST00000340913 MT1GP13640 62 aa4.91□□□□□ -1.62
HNRNPA1-202ENST00000340913 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
HNRNPA1-202ENST00000340913 MT1MQ8N339 61 aa4.89□□□□□ -1.63
HNRNPA1-202ENST00000340913 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
HNRNPA1-202ENST00000340913 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
HNRNPA1-202ENST00000340913 SSPOA2VEC9 5147 aa4.84□□□□□ -1.64
HNRNPA1-202ENST00000340913 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
HNRNPA1-202ENST00000340913 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
HNRNPA1-202ENST00000340913 MT1AP04731 61 aa4.67□□□□□ -1.66
HNRNPA1-202ENST00000340913 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
HNRNPA1-202ENST00000340913 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
HNRNPA1-202ENST00000340913 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
HNRNPA1-202ENST00000340913 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
HNRNPA1-202ENST00000340913 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
HNRNPA1-202ENST00000340913 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
HNRNPA1-202ENST00000340913 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
HNRNPA1-202ENST00000340913 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
HNRNPA1-202ENST00000340913 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
HNRNPA1-202ENST00000340913 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
HNRNPA1-202ENST00000340913 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
HNRNPA1-202ENST00000340913 MUC12Q9UKN1 5478 aa4.41□□□□□ -1.7
HNRNPA1-202ENST00000340913 PRM1P04553 51 aa4.36□□□□□ -1.71
HNRNPA1-202ENST00000340913 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
HNRNPA1-202ENST00000340913 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
HNRNPA1-202ENST00000340913 FSIP2Q5CZC0 6907 aa4.18□□□□□ -1.74
HNRNPA1-202ENST00000340913 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
HNRNPA1-202ENST00000340913 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.74
HNRNPA1-202ENST00000340913 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
HNRNPA1-202ENST00000340913 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
HNRNPA1-202ENST00000340913 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
HNRNPA1-202ENST00000340913 SPRR2EP22531 72 aa4.05□□□□□ -1.76
HNRNPA1-202ENST00000340913 SPRR2BP35325 72 aa4.05□□□□□ -1.76
HNRNPA1-202ENST00000340913 SPRR2AP35326 72 aa4.05□□□□□ -1.76
HNRNPA1-202ENST00000340913 MT3P25713 68 aa4.03□□□□□ -1.76
HNRNPA1-202ENST00000340913 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
HNRNPA1-202ENST00000340913 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
HNRNPA1-202ENST00000340913 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
HNRNPA1-202ENST00000340913 SPRR2DP22532 72 aa3.87□□□□□ -1.79
HNRNPA1-202ENST00000340913 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
HNRNPA1-202ENST00000340913 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
HNRNPA1-202ENST00000340913 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
HNRNPA1-202ENST00000340913 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
HNRNPA1-202ENST00000340913 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
HNRNPA1-202ENST00000340913 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
HNRNPA1-202ENST00000340913 MT4P47944 62 aa3.35□□□□□ -1.87
HNRNPA1-202ENST00000340913 NEBP20929 6669 aa3.35□□□□□ -1.87
HNRNPA1-202ENST00000340913 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.88
HNRNPA1-202ENST00000340913 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
HNRNPA1-202ENST00000340913 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
HNRNPA1-202ENST00000340913 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
HNRNPA1-202ENST00000340913 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
HNRNPA1-202ENST00000340913 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
HNRNPA1-202ENST00000340913 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
HNRNPA1-202ENST00000340913 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
HNRNPA1-202ENST00000340913 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.93
HNRNPA1-202ENST00000340913 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
HNRNPA1-202ENST00000340913 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
HNRNPA1-202ENST00000340913 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
HNRNPA1-202ENST00000340913 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
HNRNPA1-202ENST00000340913 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
HNRNPA1-202ENST00000340913 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
HNRNPA1-202ENST00000340913 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
HNRNPA1-202ENST00000340913 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
HNRNPA1-202ENST00000340913 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
HNRNPA1-202ENST00000340913 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
HNRNPA1-202ENST00000340913 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
HNRNPA1-202ENST00000340913 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
HNRNPA1-202ENST00000340913 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
HNRNPA1-202ENST00000340913 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 65.1 ms