RNA–Protein interactions for RNA: ENST00000340578.10

RANBP3-202, Transcript of RAN binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RANBP3, Length 3,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-202ENST00000340578 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
RANBP3-202ENST00000340578 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
RANBP3-202ENST00000340578 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
RANBP3-202ENST00000340578 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
RANBP3-202ENST00000340578 MT1EP04732 61 aa3.95□□□□□ -1.78
RANBP3-202ENST00000340578 MT1LQ93083 61 aa3.94□□□□□ -1.78
RANBP3-202ENST00000340578 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
RANBP3-202ENST00000340578 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
RANBP3-202ENST00000340578 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
RANBP3-202ENST00000340578 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
RANBP3-202ENST00000340578 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
RANBP3-202ENST00000340578 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
RANBP3-202ENST00000340578 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
RANBP3-202ENST00000340578 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
RANBP3-202ENST00000340578 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
RANBP3-202ENST00000340578 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
RANBP3-202ENST00000340578 NEBP20929 6669 aa3.74□□□□□ -1.81
RANBP3-202ENST00000340578 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
RANBP3-202ENST00000340578 MT1GP13640 62 aa3.72□□□□□ -1.81
RANBP3-202ENST00000340578 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
RANBP3-202ENST00000340578 MT1MQ8N339 61 aa3.7□□□□□ -1.82
RANBP3-202ENST00000340578 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
RANBP3-202ENST00000340578 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
RANBP3-202ENST00000340578 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
RANBP3-202ENST00000340578 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
RANBP3-202ENST00000340578 KRTAP12-4P60329 112 aa3.65□□□□□ -1.82
RANBP3-202ENST00000340578 SPRR2EP22531 72 aa3.64□□□□□ -1.83
RANBP3-202ENST00000340578 SPRR2BP35325 72 aa3.64□□□□□ -1.83
RANBP3-202ENST00000340578 SPRR2AP35326 72 aa3.64□□□□□ -1.83
RANBP3-202ENST00000340578 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
RANBP3-202ENST00000340578 LCE1EQ5T753 118 aa3.59□□□□□ -1.84
RANBP3-202ENST00000340578 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.84
RANBP3-202ENST00000340578 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
RANBP3-202ENST00000340578 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
RANBP3-202ENST00000340578 SPRR2DP22532 72 aa3.5□□□□□ -1.85
RANBP3-202ENST00000340578 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
RANBP3-202ENST00000340578 LCE3BQ5TA77 95 aa3.43□□□□□ -1.86
RANBP3-202ENST00000340578 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
RANBP3-202ENST00000340578 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
RANBP3-202ENST00000340578 PRM1P04553 51 aa3.35□□□□□ -1.87
RANBP3-202ENST00000340578 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
RANBP3-202ENST00000340578 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
RANBP3-202ENST00000340578 MT1AP04731 61 aa3.3□□□□□ -1.88
RANBP3-202ENST00000340578 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
RANBP3-202ENST00000340578 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
RANBP3-202ENST00000340578 KRTAP4-6Q9BYQ5 205 aa3.22□□□□□ -1.89
RANBP3-202ENST00000340578 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
RANBP3-202ENST00000340578 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
RANBP3-202ENST00000340578 MT4P47944 62 aa3.15□□□□□ -1.91
RANBP3-202ENST00000340578 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
RANBP3-202ENST00000340578 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
RANBP3-202ENST00000340578 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
RANBP3-202ENST00000340578 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
RANBP3-202ENST00000340578 MT3P25713 68 aa2.99□□□□□ -1.93
RANBP3-202ENST00000340578 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
RANBP3-202ENST00000340578 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.94
RANBP3-202ENST00000340578 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
RANBP3-202ENST00000340578 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
RANBP3-202ENST00000340578 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
RANBP3-202ENST00000340578 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
RANBP3-202ENST00000340578 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
RANBP3-202ENST00000340578 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
RANBP3-202ENST00000340578 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
RANBP3-202ENST00000340578 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
RANBP3-202ENST00000340578 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
RANBP3-202ENST00000340578 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
RANBP3-202ENST00000340578 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
RANBP3-202ENST00000340578 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
RANBP3-202ENST00000340578 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
RANBP3-202ENST00000340578 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
RANBP3-202ENST00000340578 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
RANBP3-202ENST00000340578 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
RANBP3-202ENST00000340578 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
RANBP3-202ENST00000340578 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
RANBP3-202ENST00000340578 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
RANBP3-202ENST00000340578 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
RANBP3-202ENST00000340578 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 75.5 ms