RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 KRTAP4-2Q9BYR5 136 aa5.95□□□□□ -1.46
H3F3C-201ENST00000340398 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
H3F3C-201ENST00000340398 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
H3F3C-201ENST00000340398 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
H3F3C-201ENST00000340398 A0A0D9SG42 100 aa5.93□□□□□ -1.46
H3F3C-201ENST00000340398 PSPHP1O15172 72 aa5.93□□□□□ -1.46
H3F3C-201ENST00000340398 MT1GP13640 62 aa5.92□□□□□ -1.46
H3F3C-201ENST00000340398 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
H3F3C-201ENST00000340398 MT4P47944 62 aa5.91□□□□□ -1.46
H3F3C-201ENST00000340398 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
H3F3C-201ENST00000340398 SPATA8Q6RVD6 105 aa5.83□□□□□ -1.48
H3F3C-201ENST00000340398 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
H3F3C-201ENST00000340398 MT1MQ8N339 61 aa5.83□□□□□ -1.48
H3F3C-201ENST00000340398 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
H3F3C-201ENST00000340398 A6NED7 52 aa5.82□□□□□ -1.48
H3F3C-201ENST00000340398 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
H3F3C-201ENST00000340398 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
H3F3C-201ENST00000340398 MT1LQ93083 61 aa5.79□□□□□ -1.48
H3F3C-201ENST00000340398 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
H3F3C-201ENST00000340398 A0A1B0GU69 56 aa5.77□□□□□ -1.49
H3F3C-201ENST00000340398 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
H3F3C-201ENST00000340398 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
H3F3C-201ENST00000340398 A0A0A0MQY5 61 aa5.72□□□□□ -1.49
H3F3C-201ENST00000340398 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
H3F3C-201ENST00000340398 A0A1B0GU33 70 aa5.7□□□□□ -1.5
H3F3C-201ENST00000340398 KRTAP5-10Q6L8G5 202 aa5.7□□□□□ -1.5
H3F3C-201ENST00000340398 UQCR11O14957 56 aa5.68□□□□□ -1.5
H3F3C-201ENST00000340398 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
H3F3C-201ENST00000340398 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
H3F3C-201ENST00000340398 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
H3F3C-201ENST00000340398 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
H3F3C-201ENST00000340398 A8MU10 97 aa5.59□□□□□ -1.51
H3F3C-201ENST00000340398 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
H3F3C-201ENST00000340398 TNP1P09430 55 aa5.52□□□□□ -1.53
H3F3C-201ENST00000340398 KRTAP5-3Q6L8H2 238 aa5.51□□□□□ -1.53
H3F3C-201ENST00000340398 KRTAP5-7Q6L8G8 165 aa5.49□□□□□ -1.53
H3F3C-201ENST00000340398 KRTAP20-2Q3LI61 65 aa5.43□□□□□ -1.54
H3F3C-201ENST00000340398 K7ERS5 55 aa5.4□□□□□ -1.54
H3F3C-201ENST00000340398 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
H3F3C-201ENST00000340398 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
H3F3C-201ENST00000340398 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
H3F3C-201ENST00000340398 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
H3F3C-201ENST00000340398 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
H3F3C-201ENST00000340398 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
H3F3C-201ENST00000340398 ROMO1P60602 79 aa5.15□□□□□ -1.59
H3F3C-201ENST00000340398 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
H3F3C-201ENST00000340398 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
H3F3C-201ENST00000340398 KRTAP5-2Q701N4 177 aa4.95□□□□□ -1.62
H3F3C-201ENST00000340398 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
H3F3C-201ENST00000340398 MT1AP04731 61 aa4.89□□□□□ -1.63
H3F3C-201ENST00000340398 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
H3F3C-201ENST00000340398 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
H3F3C-201ENST00000340398 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
H3F3C-201ENST00000340398 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
H3F3C-201ENST00000340398 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
H3F3C-201ENST00000340398 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
H3F3C-201ENST00000340398 MUC5BQ9HC84 5762 aaPredicted RBP4.72□□□□□ -1.65
H3F3C-201ENST00000340398 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
H3F3C-201ENST00000340398 MT3P25713 68 aa4.63□□□□□ -1.67
H3F3C-201ENST00000340398 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
H3F3C-201ENST00000340398 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
H3F3C-201ENST00000340398 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
H3F3C-201ENST00000340398 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
H3F3C-201ENST00000340398 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
H3F3C-201ENST00000340398 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
H3F3C-201ENST00000340398 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
H3F3C-201ENST00000340398 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
H3F3C-201ENST00000340398 INE1O15225 51 aa3.76□□□□□ -1.81
H3F3C-201ENST00000340398 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
H3F3C-201ENST00000340398 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
H3F3C-201ENST00000340398 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
H3F3C-201ENST00000340398 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
H3F3C-201ENST00000340398 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
H3F3C-201ENST00000340398 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
H3F3C-201ENST00000340398 PRM1P04553 51 aa2.66□□□□□ -1.98
H3F3C-201ENST00000340398 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
H3F3C-201ENST00000340398 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms