RNA–Protein interactions for RNA: ENST00000340160.7

TSPAN18-201, Transcript of tetraspanin 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN18, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-201ENST00000340160 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
TSPAN18-201ENST00000340160 MT1GP13640 62 aa3.45□□□□□ -1.86
TSPAN18-201ENST00000340160 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
TSPAN18-201ENST00000340160 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
TSPAN18-201ENST00000340160 MT1EP04732 61 aa3.4□□□□□ -1.87
TSPAN18-201ENST00000340160 SSPOA2VEC9 5147 aa3.39□□□□□ -1.87
TSPAN18-201ENST00000340160 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
TSPAN18-201ENST00000340160 MT1LQ93083 61 aa3.33□□□□□ -1.88
TSPAN18-201ENST00000340160 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
TSPAN18-201ENST00000340160 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
TSPAN18-201ENST00000340160 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
TSPAN18-201ENST00000340160 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
TSPAN18-201ENST00000340160 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
TSPAN18-201ENST00000340160 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
TSPAN18-201ENST00000340160 MT1MQ8N339 61 aa3.25□□□□□ -1.89
TSPAN18-201ENST00000340160 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
TSPAN18-201ENST00000340160 LCE3BQ5TA77 95 aa3.24□□□□□ -1.89
TSPAN18-201ENST00000340160 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
TSPAN18-201ENST00000340160 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
TSPAN18-201ENST00000340160 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
TSPAN18-201ENST00000340160 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
TSPAN18-201ENST00000340160 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
TSPAN18-201ENST00000340160 LCE5AQ5TCM9 118 aa3.15□□□□□ -1.9
TSPAN18-201ENST00000340160 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
TSPAN18-201ENST00000340160 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
TSPAN18-201ENST00000340160 KMT2DO14686 5537 aa3.1□□□□□ -1.91
TSPAN18-201ENST00000340160 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
TSPAN18-201ENST00000340160 LCE4AQ5TA78 99 aa3.09□□□□□ -1.92
TSPAN18-201ENST00000340160 NEBP20929 6669 aa3.02□□□□□ -1.93
TSPAN18-201ENST00000340160 MT4P47944 62 aa3.02□□□□□ -1.93
TSPAN18-201ENST00000340160 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
TSPAN18-201ENST00000340160 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
TSPAN18-201ENST00000340160 LOC100996750A0A140TA64 210 aa2.97□□□□□ -1.93
TSPAN18-201ENST00000340160 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
TSPAN18-201ENST00000340160 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
TSPAN18-201ENST00000340160 MT1AP04731 61 aa2.93□□□□□ -1.94
TSPAN18-201ENST00000340160 DSTQ03001 7570 aaKnown RBP2.92□□□□□ -1.94
TSPAN18-201ENST00000340160 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
TSPAN18-201ENST00000340160 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
TSPAN18-201ENST00000340160 MT3P25713 68 aa2.86□□□□□ -1.95
TSPAN18-201ENST00000340160 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
TSPAN18-201ENST00000340160 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
TSPAN18-201ENST00000340160 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
TSPAN18-201ENST00000340160 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
TSPAN18-201ENST00000340160 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
TSPAN18-201ENST00000340160 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
TSPAN18-201ENST00000340160 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
TSPAN18-201ENST00000340160 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
TSPAN18-201ENST00000340160 PRM1P04553 51 aa2.66□□□□□ -1.98
TSPAN18-201ENST00000340160 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
TSPAN18-201ENST00000340160 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
TSPAN18-201ENST00000340160 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
TSPAN18-201ENST00000340160 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
TSPAN18-201ENST00000340160 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -2
TSPAN18-201ENST00000340160 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
TSPAN18-201ENST00000340160 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
TSPAN18-201ENST00000340160 KRTAP5-3Q6L8H2 238 aa2.38□□□□□ -2.03
TSPAN18-201ENST00000340160 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
TSPAN18-201ENST00000340160 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
TSPAN18-201ENST00000340160 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
TSPAN18-201ENST00000340160 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
TSPAN18-201ENST00000340160 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
TSPAN18-201ENST00000340160 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
TSPAN18-201ENST00000340160 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
TSPAN18-201ENST00000340160 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
TSPAN18-201ENST00000340160 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.08
TSPAN18-201ENST00000340160 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
TSPAN18-201ENST00000340160 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
TSPAN18-201ENST00000340160 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
TSPAN18-201ENST00000340160 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
TSPAN18-201ENST00000340160 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
TSPAN18-201ENST00000340160 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
TSPAN18-201ENST00000340160 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
TSPAN18-201ENST00000340160 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
TSPAN18-201ENST00000340160 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
TSPAN18-201ENST00000340160 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
TSPAN18-201ENST00000340160 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 103.6 ms