RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
UBE3B-201ENST00000340074 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
UBE3B-201ENST00000340074 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
UBE3B-201ENST00000340074 A6NED7 52 aa5.61□□□□□ -1.51
UBE3B-201ENST00000340074 K7ERS5 55 aa5.61□□□□□ -1.51
UBE3B-201ENST00000340074 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
UBE3B-201ENST00000340074 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
UBE3B-201ENST00000340074 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
UBE3B-201ENST00000340074 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
UBE3B-201ENST00000340074 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
UBE3B-201ENST00000340074 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
UBE3B-201ENST00000340074 MT1GP13640 62 aa5.46□□□□□ -1.54
UBE3B-201ENST00000340074 KRTAP4-2Q9BYR5 136 aa5.45□□□□□ -1.54
UBE3B-201ENST00000340074 MT1LQ93083 61 aa5.44□□□□□ -1.54
UBE3B-201ENST00000340074 KRTAP12-3P60328 96 aa5.4□□□□□ -1.55
UBE3B-201ENST00000340074 PP632Q6XCG6 107 aa5.4□□□□□ -1.55
UBE3B-201ENST00000340074 CDC42SE1Q9NRR8 79 aa5.39□□□□□ -1.55
UBE3B-201ENST00000340074 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
UBE3B-201ENST00000340074 MT1MQ8N339 61 aa5.37□□□□□ -1.55
UBE3B-201ENST00000340074 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
UBE3B-201ENST00000340074 ROMO1P60602 79 aa5.29□□□□□ -1.56
UBE3B-201ENST00000340074 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
UBE3B-201ENST00000340074 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
UBE3B-201ENST00000340074 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
UBE3B-201ENST00000340074 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
UBE3B-201ENST00000340074 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
UBE3B-201ENST00000340074 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
UBE3B-201ENST00000340074 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
UBE3B-201ENST00000340074 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
UBE3B-201ENST00000340074 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
UBE3B-201ENST00000340074 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
UBE3B-201ENST00000340074 MT4P47944 62 aa4.97□□□□□ -1.61
UBE3B-201ENST00000340074 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
UBE3B-201ENST00000340074 HMCN1Q96RW7 5635 aa4.85□□□□□ -1.63
UBE3B-201ENST00000340074 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
UBE3B-201ENST00000340074 PMAIP1Q13794 54 aa4.75□□□□□ -1.65
UBE3B-201ENST00000340074 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
UBE3B-201ENST00000340074 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
UBE3B-201ENST00000340074 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
UBE3B-201ENST00000340074 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
UBE3B-201ENST00000340074 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
UBE3B-201ENST00000340074 MT1AP04731 61 aa4.63□□□□□ -1.67
UBE3B-201ENST00000340074 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
UBE3B-201ENST00000340074 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
UBE3B-201ENST00000340074 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
UBE3B-201ENST00000340074 H3BS24 57 aa4.55□□□□□ -1.68
UBE3B-201ENST00000340074 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
UBE3B-201ENST00000340074 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
UBE3B-201ENST00000340074 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
UBE3B-201ENST00000340074 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
UBE3B-201ENST00000340074 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
UBE3B-201ENST00000340074 MT3P25713 68 aa4.21□□□□□ -1.73
UBE3B-201ENST00000340074 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
UBE3B-201ENST00000340074 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
UBE3B-201ENST00000340074 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
UBE3B-201ENST00000340074 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
UBE3B-201ENST00000340074 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
UBE3B-201ENST00000340074 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
UBE3B-201ENST00000340074 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
UBE3B-201ENST00000340074 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
UBE3B-201ENST00000340074 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
UBE3B-201ENST00000340074 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
UBE3B-201ENST00000340074 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
UBE3B-201ENST00000340074 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
UBE3B-201ENST00000340074 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
UBE3B-201ENST00000340074 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
UBE3B-201ENST00000340074 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
UBE3B-201ENST00000340074 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
UBE3B-201ENST00000340074 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
UBE3B-201ENST00000340074 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
UBE3B-201ENST00000340074 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
UBE3B-201ENST00000340074 INE1O15225 51 aa2.99□□□□□ -1.93
UBE3B-201ENST00000340074 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
UBE3B-201ENST00000340074 PRM1P04553 51 aa2.73□□□□□ -1.97
UBE3B-201ENST00000340074 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
UBE3B-201ENST00000340074 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
UBE3B-201ENST00000340074 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 117.7 ms