RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

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Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
BRPF3-201ENST00000339717 MT1AP04731 61 aa3.69□□□□□ -1.82
BRPF3-201ENST00000339717 ABCA13Q86UQ4 5058 aa3.68□□□□□ -1.82
BRPF3-201ENST00000339717 LPAP08519 4548 aa3.67□□□□□ -1.82
BRPF3-201ENST00000339717 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
BRPF3-201ENST00000339717 TNXBP22105 4242 aa3.66□□□□□ -1.82
BRPF3-201ENST00000339717 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.82
BRPF3-201ENST00000339717 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.83
BRPF3-201ENST00000339717 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.83
BRPF3-201ENST00000339717 KRTAP9-6A0A140TA67 174 aa3.59□□□□□ -1.83
BRPF3-201ENST00000339717 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
BRPF3-201ENST00000339717 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
BRPF3-201ENST00000339717 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
BRPF3-201ENST00000339717 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
BRPF3-201ENST00000339717 MT1MQ8N339 61 aa3.53□□□□□ -1.84
BRPF3-201ENST00000339717 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
BRPF3-201ENST00000339717 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
BRPF3-201ENST00000339717 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
BRPF3-201ENST00000339717 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
BRPF3-201ENST00000339717 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
BRPF3-201ENST00000339717 FSIP2Q5CZC0 6907 aa3.46□□□□□ -1.86
BRPF3-201ENST00000339717 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
BRPF3-201ENST00000339717 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.86
BRPF3-201ENST00000339717 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
BRPF3-201ENST00000339717 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
BRPF3-201ENST00000339717 MUC2Q02817 5179 aa3.34□□□□□ -1.87
BRPF3-201ENST00000339717 MT4P47944 62 aa3.32□□□□□ -1.88
BRPF3-201ENST00000339717 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
BRPF3-201ENST00000339717 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
BRPF3-201ENST00000339717 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
BRPF3-201ENST00000339717 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
BRPF3-201ENST00000339717 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
BRPF3-201ENST00000339717 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
BRPF3-201ENST00000339717 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
BRPF3-201ENST00000339717 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
BRPF3-201ENST00000339717 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.15□□□□□ -1.9
BRPF3-201ENST00000339717 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
BRPF3-201ENST00000339717 LCE1FQ5T754 118 aa3.09□□□□□ -1.92
BRPF3-201ENST00000339717 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
BRPF3-201ENST00000339717 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
BRPF3-201ENST00000339717 USH2AO75445 5202 aa3.04□□□□□ -1.92
BRPF3-201ENST00000339717 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
BRPF3-201ENST00000339717 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
BRPF3-201ENST00000339717 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
BRPF3-201ENST00000339717 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
BRPF3-201ENST00000339717 KRTAP5-9P26371 169 aa2.9□□□□□ -1.95
BRPF3-201ENST00000339717 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.95
BRPF3-201ENST00000339717 KMT2DO14686 5537 aa2.81□□□□□ -1.96
BRPF3-201ENST00000339717 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
BRPF3-201ENST00000339717 NEBP20929 6669 aa2.72□□□□□ -1.97
BRPF3-201ENST00000339717 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
BRPF3-201ENST00000339717 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
BRPF3-201ENST00000339717 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
BRPF3-201ENST00000339717 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
BRPF3-201ENST00000339717 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -2
BRPF3-201ENST00000339717 KRTAP4-6Q9BYQ5 205 aa2.54□□□□□ -2
BRPF3-201ENST00000339717 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
BRPF3-201ENST00000339717 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
BRPF3-201ENST00000339717 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
BRPF3-201ENST00000339717 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
BRPF3-201ENST00000339717 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
BRPF3-201ENST00000339717 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
BRPF3-201ENST00000339717 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
BRPF3-201ENST00000339717 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
BRPF3-201ENST00000339717 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
BRPF3-201ENST00000339717 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
BRPF3-201ENST00000339717 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
BRPF3-201ENST00000339717 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
BRPF3-201ENST00000339717 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
BRPF3-201ENST00000339717 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
BRPF3-201ENST00000339717 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
BRPF3-201ENST00000339717 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
BRPF3-201ENST00000339717 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
BRPF3-201ENST00000339717 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
BRPF3-201ENST00000339717 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
BRPF3-201ENST00000339717 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
BRPF3-201ENST00000339717 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 220.3 ms