RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
CCNY-202ENST00000339497 SPRR2DP22532 72 aa5.24□□□□□ -1.57
CCNY-202ENST00000339497 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
CCNY-202ENST00000339497 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
CCNY-202ENST00000339497 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
CCNY-202ENST00000339497 MT1MQ8N339 61 aa5.12□□□□□ -1.59
CCNY-202ENST00000339497 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
CCNY-202ENST00000339497 LCE3DQ9BYE3 92 aa5.08□□□□□ -1.6
CCNY-202ENST00000339497 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
CCNY-202ENST00000339497 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
CCNY-202ENST00000339497 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
CCNY-202ENST00000339497 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
CCNY-202ENST00000339497 USH2AO75445 5202 aa4.91□□□□□ -1.62
CCNY-202ENST00000339497 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
CCNY-202ENST00000339497 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
CCNY-202ENST00000339497 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
CCNY-202ENST00000339497 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
CCNY-202ENST00000339497 KMT2DO14686 5537 aa4.79□□□□□ -1.64
CCNY-202ENST00000339497 MT3P25713 68 aa4.74□□□□□ -1.65
CCNY-202ENST00000339497 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
CCNY-202ENST00000339497 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
CCNY-202ENST00000339497 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
CCNY-202ENST00000339497 MT4P47944 62 aa4.73□□□□□ -1.65
CCNY-202ENST00000339497 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
CCNY-202ENST00000339497 MT1AP04731 61 aa4.67□□□□□ -1.66
CCNY-202ENST00000339497 PRM1P04553 51 aa4.61□□□□□ -1.67
CCNY-202ENST00000339497 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
CCNY-202ENST00000339497 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
CCNY-202ENST00000339497 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
CCNY-202ENST00000339497 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
CCNY-202ENST00000339497 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
CCNY-202ENST00000339497 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
CCNY-202ENST00000339497 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
CCNY-202ENST00000339497 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
CCNY-202ENST00000339497 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
CCNY-202ENST00000339497 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
CCNY-202ENST00000339497 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
CCNY-202ENST00000339497 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
CCNY-202ENST00000339497 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
CCNY-202ENST00000339497 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
CCNY-202ENST00000339497 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
CCNY-202ENST00000339497 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
CCNY-202ENST00000339497 LCE4AQ5TA78 99 aa4.09□□□□□ -1.76
CCNY-202ENST00000339497 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
CCNY-202ENST00000339497 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
CCNY-202ENST00000339497 NEBP20929 6669 aa3.93□□□□□ -1.78
CCNY-202ENST00000339497 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
CCNY-202ENST00000339497 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
CCNY-202ENST00000339497 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
CCNY-202ENST00000339497 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
CCNY-202ENST00000339497 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
CCNY-202ENST00000339497 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CCNY-202ENST00000339497 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
CCNY-202ENST00000339497 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
CCNY-202ENST00000339497 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
CCNY-202ENST00000339497 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
CCNY-202ENST00000339497 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.87
CCNY-202ENST00000339497 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
CCNY-202ENST00000339497 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
CCNY-202ENST00000339497 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
CCNY-202ENST00000339497 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
CCNY-202ENST00000339497 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
CCNY-202ENST00000339497 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
CCNY-202ENST00000339497 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
CCNY-202ENST00000339497 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
CCNY-202ENST00000339497 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
CCNY-202ENST00000339497 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
CCNY-202ENST00000339497 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
CCNY-202ENST00000339497 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
CCNY-202ENST00000339497 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CCNY-202ENST00000339497 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
CCNY-202ENST00000339497 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
CCNY-202ENST00000339497 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
CCNY-202ENST00000339497 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
CCNY-202ENST00000339497 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
CCNY-202ENST00000339497 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
CCNY-202ENST00000339497 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 79.7 ms